Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01465 ATGGGTTACGAAGACGATCCGTATCGTGACGAGGACGGAGAGCCCTTGATGGACTACGACGACATTCAATCCGACCGCGAGCCATCTCCGGAGGCGCGCCATCAGCTCGACGATTTCGAGGAGGACGTCGACGAGTGGCGCGGCCGCGATCGGTCGCAGACGCCTGTCTACGACACCGATCCGTCGCGGTCGAAGCCGCGGAAGAGGCTGATCAAGAAGAGCGACGCCGGGAAGCAGGCGGTGGCGCCGGAGCTGGAGGATGAGGACGAGGAGGGGTATGTTCCGGAGGCGAGGTTCGACGAGGGGGACGCTGGGAGGAAGAGGAAGAAGGGGAAGGAGAGTGGGAGTGGGAAGAAAGAGAAGAGGATGAAGGGGGAGAAGAGGTTTGGGAGTAGCAGTGGGAAGGGTGGGTCCAAATTTGGGGGTGGAAAGAAAGGGTTTGGAGGGAAGGCAGGGAAGGATCATGATGGTGAAGTTAAGGAGATGTGGGATACAATTGCTGGAGGAGATTCTGAGGATGATCAAGAGGGTGTCAGGAATGTGGATGATGACAACTTTATAGATGATACTGGAGTGGAACCTGCTTATTATGGTATTGATGAACCACATTCTCCTGGTGATGCTCCCCAGGCGGAGGAGGGTGAAGAAGATGAAGAAATTAAGGATCTTTTCAAGATAGGTAAGAAAAAGAAGAAGAATGAGAGAAGTCCCGCAGAAATAGCTTTATTAGTTGAGAATGTCATGGCTGAGCTTGAGGTTACAGCTGAGGAGGATGCTGAACTTAATAGACAGGGGAAGCCTGCCATTAATAAACTGAAGAAGTTGAATCTTCTTACAGAAGTCCTCTCAAAGAAACAGCTTCAACTAGAGTTTTTAGATCATGGAGTGCTGACTTTATTGAAGAATTGGCTTGAGCCACTTCCTGATGGAAGCTTGCCAAATATAAATATACGCACGGAAATTTTGAAGATTTTGAATGATTTTCCTATAGATCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGAAAGGTAATTATGTTTTTATCGAAGTCCGATGAAGAAATCAATGCGAATAGGAAACTAGCCAAGGAGCTGGTTGATAAGTGGAGCCGACCTATATTTAATAAGAGTACCAGGTTTGAAGACATGAGGAATGTAGAGGATGATAGGGTTCCTTTTAGGAGGCCATCAGTTAAAAAGCCGGCAAATAAAGCTGCAGGAATGGAATCTAGAGACAGTGATCTTGATTTGGAACTTTCACAGCCTAGGTCTGGACAGTCCTCTTCTAGGCAGCATGCATCAAGGCCGGAAGCAACACCTTTGGATTTTGTGATCCGTCCCCAGTCTAAGATTGATCCGGAAGAAATTAGAGCACGAGCAAAACAAGCTGCACAAGATCAGCAGCGTATGAAGATGAATAAGAAATTGCAGCAATTGAGGGCACCAAAAAAGAAGCAGCTTCAGGCTACAAAACTGAGCGTGGAAGGTCGTGGTATGATCAAATATTTATAA 1527 0.4741 MGYEDDPYRDEDGEPLMDYDDIQSDREPSPEARHQLDDFEEDVDEWRGRDRSQTPVYDTDPSRSKPRKRLIKKSDAGKQAVAPELEDEDEEGYVPEARFDEGDAGRKRKKGKESGSGKKEKRMKGEKRFGSSSGKGGSKFGGGKKGFGGKAGKDHDGEVKEMWDTIAGGDSEDDQEGVRNVDDDNFIDDTGVEPAYYGIDEPHSPGDAPQAEEGEEDEEIKDLFKIGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLNLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTEILKILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEINANRKLAKELVDKWSRPIFNKSTRFEDMRNVEDDRVPFRRPSVKKPANKAAGMESRDSDLDLELSQPRSGQSSSRQHASRPEATPLDFVIRPQSKIDPEEIRARAKQAAQDQQRMKMNKKLQQLRAPKKKQLQATKLSVEGRGMIKYL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01465 508 MobiDBLite consensus disorder prediction 397 493 - -
Pumo8g01465 508 MobiDBLite consensus disorder prediction 148 186 - -
Pumo8g01465 508 MobiDBLite consensus disorder prediction 424 440 - -
Pumo8g01465 508 PANTHER PROTEIN IWS1 HOMOLOG 1 1 508 IPR044204 GO:0009742|GO:0032784
Pumo8g01465 508 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 237 384 IPR035441 -
Pumo8g01465 508 MobiDBLite consensus disorder prediction 97 129 - -
Pumo8g01465 508 MobiDBLite consensus disorder prediction 453 469 - -
Pumo8g01465 508 MobiDBLite consensus disorder prediction 1 218 - -
Pumo8g01465 508 MobiDBLite consensus disorder prediction 19 65 - -
Pumo8g01465 508 Pfam TFIIS helical bundle-like domain 323 378 IPR017923 -
Pumo8g01465 508 Coils Coil 244 264 - -
Pumo8g01465 508 ProSiteProfiles TFIIS N-terminal domain profile. 298 381 IPR017923 -
Pumo8g01465 508 MobiDBLite consensus disorder prediction 1 18 - -
Pumo8g01465 508 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 293 381 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01465 Pumo-Chr8 48455626 48460133 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pumo8g01465 Med26 1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01465 K17498 - gmx:100801805 879.396