Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01459 ATGACGTTACTCTCTCCGCACCCCAACATTCTCCAAATCATGGACGCCTTTGAAGACACTGAGGCCTCCTTCATCGTGGTGGAGCTCTGCCAGCCGCGCACCCTCTTCGACCGCATCAACGACCCCTTGCCGGAGCCCCACGCCGCCTCCCTCTTGATGCAGCTTCTCGAAGTCGTCACACACTGCCACGGCCTTGGACTCACGCACATGGATATCAAGCTCGACAACCTCTTGTTCGACCAGGGGACAACCTTAAACTCTTCGACTTAG 270 0.5704 MTLLSPHPNILQIMDAFEDTEASFIVVELCQPRTLFDRINDPLPEPHAASLLMQLLEVVTHCHGLGLTHMDIKLDNLLFDQGTTLNSST 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01459 89 ProSitePatterns Serine/Threonine protein kinases active-site signature. 67 79 IPR008271 GO:0004672|GO:0006468
Pumo8g01459 89 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01459 89 SUPERFAMILY Protein kinase-like (PK-like) 1 82 IPR011009 -
Pumo8g01459 89 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 83 - -
Pumo8g01459 89 Gene3D Transferase(Phosphotransferase) domain 1 1 87 - -
Pumo8g01459 89 Pfam Protein kinase domain 4 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01459 Pumo-Chr8 48359778 48360047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01459 1 83 EF-hand Containing Proteins AT2G31500 44.706 1.82e-17 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo8g01459 Pkinase 3.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01459 - K08794 gmx:547573 120.938