Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01423 ATGGATCGTCGTACGGTGTCGCTGTCCAGTGAGATTTTCACCCAGAAGCAGAATCCGAAGCGCTGCGCCTCAAGGCCTTGGCGGAGTCCAAGTTCAAAGCCTCCAACAACGCCAAATCCGCTCTCAAGTACGCCAAGCGCGCCCAGCGCCTCTGCCCGCACCTCGCCGGCGTGTCCGGAGACCGTCGCCGCCCTCGCCGTCCTCGCCGCGCCGGACTGGTACCGCGCCCTCGGCGCCGAGCCCTTCGCGAGCAGCAGCGTCATCCGGAGGCAGTACAAGAAGCTCGCGCTGCTCATCCACCCCGACAAGAGCCCCCACGTGGCGTCCGAGGAGGCCTTCAAGCTCGTCGGCGAGGCCTTCCACCTCCTCTCCGACAGGACCCGCCGCCGAGAGTACGACGCCGAGCTCCGCCGCAGGATTGCGGCGGAGAGGGAGACGTTCTGGACCGCCTGCTCCACTTGCAGGCTCTTGCATAAGTTTGAGAGGAGGTACTTGGGGCAGGAATTGGTGTGTCCGAGTTGTGAGAGGAGTTTTAGGGCTGTGGAAGCGGTTCAGAGTGATGGGGATGAGGATGGGGATGGTAGGGTTAGGAGTAGGAGGTTGAAGGAGATGGAAAAGAGGAAACTTGGGGTGAAAGGGAAAGTGGGTGGTGAGAAAGGTGATGAATTGGGGAATGAGAAGGAAAGGGGATTGAGGAAGAGAATGTGTTCAGTTGGGGAGGTTTTGGAGAGGGCTAAGCCTAGTAAGAGGGTTAAGAATGGGGAGGAAATGATGACATTGGCTGAATTTCAGAATGAGGTGAAGAGAAAGTTGCAGAGGAAAAAGTTGGAGGAAAAAGGAAAGGAAAAGGAAAAGGAGGAGGAGGATGGAATTGAGAAGAGGAGCAACCGGGGGGAGAGGCGGCGGGGATTGAGAAACAATGGAGGTTTAGAGGTTGGGGAAGTGAGGGGTTCGAAGAAGAGTGTGAAGCTTGCAATTGAGGAGAAGCGTGGGAGTTTGGAGAAGAGGAAGGGGTTGAGAATTGAGAAGCATAGAGGATCTAGTGGAGGGGATTTGGAGAATATGGCGGTGGTGGATTCGGATTTTTATGATTTTGACAAAGATAGAGTGGAGAGAAGCTTTAAGAAAGGCCAAGTGTGGGCGGTGTATGACGATGATGATGGAATGCCAAGGAGTTATGCCTTGATTGATGAAACTGTCTCAGTGAATCCTTTTGGAGTGAGGATAAGTTGGTTGGATGTACAAAGCAGTGGGGATGGGAGGATAGTTAGTAGGGAGAAAATGGGGGCAGCACGGGAGGTTTACAAAATTTACCCCAAGAAGGGCTCGGTATGGGCGCTTTATGGTGAGGGAAGTATTGATGCAGATGAGGGCAAGAGATGCTATGACATTGTTGTGTTTTTGACGAGTTACAGTGAGGCGAATGGTCTGAGCATGGCGTATCTTGAGAAGGTTGAAGGTTACAAGACAGTATTTAAGAGACAAGAGAACGGGAGTGGTGCTATTAGATTTCTTGGGAAGGATGACATGTGGTTAGTTTCTCATCAGATTCCTGCACGGAAGCTTCTTTGTGATGAAACTCCTGAACTGTTGAAAGGCTGTTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTACTATCGGTGGCATAGATAATTGA 1665 0.5225 MDRRTVSLSSEIFTQKQNPKRCASRPWRSPSSKPPTTPNPLSSTPSAPSASARTSPACPETVAALAVLAAPDWYRALGAEPFASSSVIRRQYKKLALLIHPDKSPHVASEEAFKLVGEAFHLLSDRTRRREYDAELRRRIAAERETFWTACSTCRLLHKFERRYLGQELVCPSCERSFRAVEAVQSDGDEDGDGRVRSRRLKEMEKRKLGVKGKVGGEKGDELGNEKERGLRKRMCSVGEVLERAKPSKRVKNGEEMMTLAEFQNEVKRKLQRKKLEEKGKEKEKEEEDGIEKRSNRGERRRGLRNNGGLEVGEVRGSKKSVKLAIEEKRGSLEKRKGLRIEKHRGSSGGDLENMAVVDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRSYALIDETVSVNPFGVRISWLDVQSSGDGRIVSREKMGAAREVYKIYPKKGSVWALYGEGSIDADEGKRCYDIVVFLTSYSEANGLSMAYLEKVEGYKTVFKRQENGSGAIRFLGKDDMWLVSHQIPARKLLCDETPELLKGCWELDPASLPSDLLTIGGIDN 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01423 554 PANTHER BNAC03G44070D PROTEIN 61 543 - -
Pumo8g01423 554 SMART dnaj_3 71 128 IPR001623 -
Pumo8g01423 554 Coils Coil 268 289 - -
Pumo8g01423 554 PRINTS DnaJ domain signature 92 107 IPR001623 -
Pumo8g01423 554 PRINTS DnaJ domain signature 108 128 IPR001623 -
Pumo8g01423 554 PRINTS DnaJ domain signature 74 92 IPR001623 -
Pumo8g01423 554 CDD DnaJ 72 125 IPR001623 -
Pumo8g01423 554 Pfam Domain of unknown function (DUF3444) 354 422 IPR024593 -
Pumo8g01423 554 Pfam Domain of unknown function (DUF3444) 422 523 IPR024593 -
Pumo8g01423 554 ProSiteProfiles dnaJ domain profile. 72 136 IPR001623 -
Pumo8g01423 554 Pfam DnaJ domain 72 133 IPR001623 -
Pumo8g01423 554 MobiDBLite consensus disorder prediction 1 55 - -
Pumo8g01423 554 SUPERFAMILY Chaperone J-domain 65 136 IPR036869 -
Pumo8g01423 554 MobiDBLite consensus disorder prediction 274 307 - -
Pumo8g01423 554 MobiDBLite consensus disorder prediction 274 312 - -
Pumo8g01423 554 MobiDBLite consensus disorder prediction 7 25 - -
Pumo8g01423 554 Gene3D DnaJ domain 66 153 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01423 Pumo-Chr8 46938558 46942645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01423 71 185 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.593 3.83e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01423 - - gmx:100814434 735.332