Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01410 ATGGTGGAAAGAAGAGTGACTTTATCAAAGGAAGTTAGAAATGGGATAGAATTTTTGAAGCGCAAAAGGCTTCAACGTGCAAAATCTGTCACTGCCACCCAGACAAGTGTTGCTAACATGATGAACAGAAGTGGAGGAGATGCTTTAAGATCTTCAGCATCATGTGGCATGAGATTGCATGGTAATGCTGATGTCTTCTCCAAGCGCAAGGTGGATAAGTTTGATACAAATGACCTGGAATGGACTGATAAAATTCCAGAATGTCCTGTGTATTCTCCAACAAAGGAGGAATTTGAGGATCCTTTGATTTATTTGCAAAAGATAGCTCCTGAAGCTTCTAAATATGGTATATGCAAGATTATTTCCCCTTTGAGTGCTTCGGTACCTGCTGGGGTTGTTTTATTGAAGGAGAAAGCAGGATTCAAGTTTACAACTAGGGTGCAGCCCCTTCGCCTTGCTGAATGGGATACTGAAGACAAAGTCACATTTTTTATGAGTGGAAGAAATTATACATTTCGTGATTTTGAGAAAATGGCAAACAAGGTATTTGCACGAAGATATTGCAGTGCTGGATGTCTTCCTTCCACATTCTTGGAAAAAGAATTTTGGCATGAAATTGGTTGTGGGAAAATGGAAACTGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCATCTTCTCCTGCTGACCAGCTGGGGAACAGCAAATGGAATTTGAAGAAACTTTCAAGGTTGCCCAAATCGATTTTACGGCTCTTGGAAACATCAATTCCGGGAGTAACGGAACCCATGCTATACATTGGAATGCTGTTTAGTATCTTTGCTTGGCATGTAGAGGATCATTATTTGTACAGCATTAACTATCATCACTGTGGGGCATCAAAAACATGGTACGGTATTCCAGGGCATGCAGCTTTGGACTTTGAAAGGGTGGTGAGAGAACACGTGTACACTAATGATATTTTGTCAAGTGATGGGGAAGATGGAGCCTTTGATGTTCTCCTGGGGAAAACAACACTATTTCCGCCAAATATTTTGTTGGAGCATGAAGTCCCTGTCTACAAGGCTGTTCAAAAGCCAGGGGAGTTTATAATAACATTCCCTAGAGCATATCACGCTGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCAATTGGTGATTGGTTTCCTTTAGGGGCTGTTGCTAGCAGAAGATATGCACTTCTTAACAGGGTTCCTTTACTGCCCCATGAAGAACTTCTATGCAAAGAAGCAATGCTTCTTCGGACATGCTTGGAACTTGAAGATTCTGACTTTCCTTCTTCAGACTTGTTTTCTCATAATAGCATTAAGATTTCATTTGTTAACTTGATGCGTTTCGAACATTGTGCTCGATGGTTCCTGATGAAATCAAGGGCAAGTATAAATGTCTCTTCTCATTCCCATGGCACGATTCTCTGTAGCCTTTGCAAACGCGACTGTTACGTAGCTTATGTTGACTGCAACTGTCACAGGCATCCTGTATGCCTACGTCATGATGTTGATTCTCTTGGCTTCAACTGTGGGAGCAAACACACACTTTATTTGAGGGAGGATATTATGGATATGGAAGCTGCAGCCAAGATGTTTGAGCAGGAAGATGGGATATTGGATGAGATAAGGAAGCAAACCAAAAGTGACCAAAATATGTATGCATATCCTTTGTCAAACATGTTTCAGAGAGCCGAGGCAAATGGATACACGCCTTATTGTGAGCTAAAACTTGATTCTGTTGTTGAATTTTATGCAACTCCAGAGCACTCAACAAATAATCAAGAATACAGTTCACAAAATCAATCTGTCGTTGTACATTGCTCTGAAAATCAAAAACCAGTGGTATCTGAGGTTTCCTTTTCTTCTGCCACATCCACTTTGTGCTCTCTTTCAGAATCTCTTGAGAGCTTTTCTGCTCCCAAAAATGCTGAGGGGCATACTAACATCAATGAAAGTATTATTGATTTTGAAGAGTTTGCTGAAAGAATATCCAACAGTGCATGCGAATCTTCATTATCCCCTGCTGTGTATCATGAAAGCTCGGTTAAACCACAGGGTGATCTTCAGAGATTTGATACAAAACCCGTTGTGGACGAGAGTGATGATTCTGATTCAGAGATATTTAGGGTAAAGCGCCCTTCTTCTCTGAAAGCAGAGAGGAGAAATCTGAATGATGCTATGTCTTCAAAGCATACTGAGCAGCAGGGACTCAAACGACTGAAGAAAATCCTTCCTGAAGGAAAGAGTGGGCAACCAATGGATTTCAGCAGAAGCAATGAATCAGGTTACAAATACAGTCACCCTGTTAACCATAAAGGTCATGCTGAAATTTCCTCCAGGGACAGATTTGCAAGGGGTAATGGCATTCCCATTTCTATAAGATATAAGAAGTTAGGCAACGAGGAAATAAGCATGCAACGAGATCACCACCACCACCGGAGAGATAGGTTGCAGCAGCAGACATTTAGGGAACCGCCTTCCATCGAGCTTGAGCCAAAGCGCCTTAAAGTCCGAGGCCCTTCATATTTAGGCTTAGAGAGCAGATTGAATTGA 2580 0.4151 MVERRVTLSKEVRNGIEFLKRKRLQRAKSVTATQTSVANMMNRSGGDALRSSASCGMRLHGNADVFSKRKVDKFDTNDLEWTDKIPECPVYSPTKEEFEDPLIYLQKIAPEASKYGICKIISPLSASVPAGVVLLKEKAGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKMANKVFARRYCSAGCLPSTFLEKEFWHEIGCGKMETVEYACDVDGSAFSSSPADQLGNSKWNLKKLSRLPKSILRLLETSIPGVTEPMLYIGMLFSIFAWHVEDHYLYSINYHHCGASKTWYGIPGHAALDFERVVREHVYTNDILSSDGEDGAFDVLLGKTTLFPPNILLEHEVPVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAVASRRYALLNRVPLLPHEELLCKEAMLLRTCLELEDSDFPSSDLFSHNSIKISFVNLMRFEHCARWFLMKSRASINVSSHSHGTILCSLCKRDCYVAYVDCNCHRHPVCLRHDVDSLGFNCGSKHTLYLREDIMDMEAAAKMFEQEDGILDEIRKQTKSDQNMYAYPLSNMFQRAEANGYTPYCELKLDSVVEFYATPEHSTNNQEYSSQNQSVVVHCSENQKPVVSEVSFSSATSTLCSLSESLESFSAPKNAEGHTNINESIIDFEEFAERISNSACESSLSPAVYHESSVKPQGDLQRFDTKPVVDESDDSDSEIFRVKRPSSLKAERRNLNDAMSSKHTEQQGLKRLKKILPEGKSGQPMDFSRSNESGYKYSHPVNHKGHAEISSRDRFARGNGIPISIRYKKLGNEEISMQRDHHHHRRDRLQQQTFREPPSIELEPKRLKVRGPSYLGLESRLN 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01410 859 MobiDBLite consensus disorder prediction 701 715 - -
Pumo8g01410 859 SMART cupin_9 232 405 IPR003347 -
Pumo8g01410 859 ProSiteProfiles JmjC domain profile. 235 405 IPR003347 -
Pumo8g01410 859 MobiDBLite consensus disorder prediction 729 774 - -
Pumo8g01410 859 FunFam Lysine-specific demethylase isoform A 83 432 - -
Pumo8g01410 859 Pfam jmjN domain 89 121 IPR003349 -
Pumo8g01410 859 ProSiteProfiles JmjN domain profile. 88 129 IPR003349 -
Pumo8g01410 859 MobiDBLite consensus disorder prediction 729 754 - -
Pumo8g01410 859 Pfam C5HC2 zinc finger 485 536 IPR004198 -
Pumo8g01410 859 SMART JmjN_1 87 128 IPR003349 -
Pumo8g01410 859 Pfam JmjC domain, hydroxylase 265 388 IPR003347 -
Pumo8g01410 859 Gene3D Cupin 81 410 - -
Pumo8g01410 859 SUPERFAMILY Clavaminate synthase-like 166 421 - -
Pumo8g01410 859 MobiDBLite consensus disorder prediction 687 715 - -
Pumo8g01410 859 MobiDBLite consensus disorder prediction 814 829 - -
Pumo8g01410 859 PANTHER LYSINE-SPECIFIC DEMETHYLASE 80 818 - -
Pumo8g01410 859 MobiDBLite consensus disorder prediction 814 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01410 Pumo-Chr8 46763700 46769736 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01410 85 423 JUMONJI Transcription Factor Family AT1G30810 36.160 1.59e-62 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pumo8g01410 JmjC 3.2e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01410 - - gmx:100798611 1619.36