Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01380 ATGGCCCCTTCATTCGACACAAGTACTCACACAATATGCGTCATGGACGCTTCGGGCCACTTGGGCTTCAGCCTCGTCCAGAGACTCCTCCAAAGGGGCTACACCGTCCATGCCTCAGTTCAAAAATATGGGGAAGAAAACCTATTCAATGGAATTTCAGCCGATCCCGATAAGCTCAAGGTTTTTCGATCTGACCCATTTGATTACCATAGCATAATCGATGCACTCAAAGGCTGCTCTGGTTTGTTCTACACATTTGAACCTCCCCTTGACCAACCAAATTACGATGAATACATGGCAGACGTGGAAGTAAGAGCAGCACACAACGTGGTGGAAGCATGTGCTCAGACTGAAACAATAGATAAAGTGGTTTTCACATCCTCAGCTACCGCAGTTGTTTGGAGGGAAGATCGCAAGACCATGGAACTCGATCTAGATGAGAGACACTGGAGTGATGTCAATTTCGGTCGCAAATTCAAGTTATGGCATGGGGTGTCAAAGACAATGGCAGAGAAGAGCGCGTGGGCCTTGGCAATGGACAGAGGAGTGAATATGGTGTCCATCAACGCAGGCTTATTGATGGCTCATGATCTCTCCATCAAACACCCTTACCTTAGAGGAGCCGCTGAGATGTACGAGGATGGGGTGTTCGTGACCGTTGATTTGCCCTTCTTGGTCGATGCCCACATCTGCGTCTACGAGGATGTCTCATCCTACGGTCGTTATTTGTGCTTCAATCACATCATCAACACCCACGACGACGCCGTTCAGCTCGCCCGCAAGTTGACGCCCGGTGCTTCCTCTTCCTTGCCGCAAAGTGGCGACTACGGGAAGAGTTTTATCGAACAGAGAATTAGCAACAAGAAGTTGAACAAATTGATGGTGAACTTCGAGGCTTGA 900 0.4878 MAPSFDTSTHTICVMDASGHLGFSLVQRLLQRGYTVHASVQKYGEENLFNGISADPDKLKVFRSDPFDYHSIIDALKGCSGLFYTFEPPLDQPNYDEYMADVEVRAAHNVVEACAQTETIDKVVFTSSATAVVWREDRKTMELDLDERHWSDVNFGRKFKLWHGVSKTMAEKSAWALAMDRGVNMVSINAGLLMAHDLSIKHPYLRGAAEMYEDGVFVTVDLPFLVDAHICVYEDVSSYGRYLCFNHIINTHDDAVQLARKLTPGASSSLPQSGDYGKSFIEQRISNKKLNKLMVNFEA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01380 299 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
Pumo8g01380 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 264 IPR036291 -
Pumo8g01380 299 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 299 - -
Pumo8g01380 299 Gene3D - 4 299 - -
Pumo8g01380 299 CDD FR_SDR_e 13 295 - -
Pumo8g01380 299 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01380 Pumo-Chr8 46372256 46375539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01380 11 297 Monolignol Biosynthesis Gene Families AT5G58490 30.921 1.69e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01380 - - gmx:100793329 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01380 8 46372256 46375539 Pumo8g01380 8 46372256 46375539 ECH