Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01375 ATGGCAATTGAAAACCAAGACACCACTGTCAGAGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGCCCTGATGATGAGGACAATAGGTGGCCACCATGGTTGAAGCCACTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTACATGCTGATTCTCACAAGAGTGAATGTAACATGTATTGCTTGGACTGTATGAATGGCCCTCTCTGCTCTCTCTGCCTCGTCCACCACAAGGATCACCGTGCAATCCAGATTAGGAGGTCCTCATACCATGATGTGATCAGGGTCTCTGAGATTCAGAAGGTGTTGGACATCACTGGTGTCCAAACCTACATTATCAACAGCGCAAGGGTGGTGTTTTTGAACGAGAGACCTCAACCAAGGCCTGGAAAAGGGGTCACAAACACTTGTGAAGTCTGCGAGCGTAGCCTTCTTGATTCTTACCGCTTCTGTTCTCTTGGTTGCAAGACTGTTGGAACATCCAAGAACTTCCAGAAGAACAAGCAGTCAATGGCAATGTCATCAGATTCTGAGGATTCATACAGTAGCAACAGTGGCCATGGCCTTAAGAAAAACTGCAAAACTCAGAGCTTCACACCATCCACACCACCCCCAACTTCTGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGGGGACTAATCATAGAATATTAG 708 0.4689 MAIENQDTTVREIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLVHHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKTVGTSKNFQKNKQSMAMSSDSEDSYSSNSGHGLKKNCKTQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01375 235 CDD Bbox2 49 88 - -
Pumo8g01375 235 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 27 228 - -
Pumo8g01375 235 MobiDBLite consensus disorder prediction 169 212 - -
Pumo8g01375 235 MobiDBLite consensus disorder prediction 169 224 - -
Pumo8g01375 235 Pfam PLATZ transcription factor 89 159 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01375 Pumo-Chr8 46295317 46298004 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pumo8g01375 PLATZ 1.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01375 - - gmx:100797900 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01375 8 46295317 46298004 Pumo8g01375 8 46295317 46298004 ECH