Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01360 ATGTCTGTTTTCTCAAGGATTGTAAATTTTATTGTAATGGCAATTATACTTTCCAAGTTACTTATCTTAAATCTTAATCCTCAGTTTTCATTCTTGGTTTTTCAGATGGGAGATGTGGCAAAGGACCTAACAGCTGGGACTGTTGGAGGGGCAGCACAATTGATAGTTGGACACCCATTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCTGGCCAGCTTCCCAAGTATTCTGGTGCAATTGATGCCGTCAAGCAGACGGTGGCAGCTGAAGGCCCAAGGGGTTTATACAAGGGTATGGGAGCCCCACTTGCCACAGTAGCCGCCTTCAATGCTGTCCTGTTTACAGTTAGGGGACAAATGGAAGCATTACTGAAGTCGCATCCCGGTGCTACCCTCACCATAAATCAGCAGGTTGTTTGTGGAGCTGGAGCTGGAGTTGCTGTTTCCTTTCTAGCTTGCCCTACTGAATTGATAAAGTGCAGATTGCAAGCACAAAGTGCGCTAGCTGGCACCGGAACAGCTGCAGTGGCAGTGAAATATGGGGGACCCATGGATGTGGCCAGGCATGTTCTCAGGTCAGAAGGGGGCGTAAAAGGTCTTTTCAGGGGCTTGGTTCCCACCATGGCACGCGAAGTACCTGGAAATGCTGCAATGTTTGGTGTATATGAAGCATTAAAGCGATTACTTGCTGGTGGCACTGATACCTCAGGACTGGGTAGAGGTTCCCTTATGCTTGCTGGAGGCTTAGCTGGAGCTGTCTTCTGGCTCACAGTTTACCCAACTGATGTTGTTAAGAGTGTGATTCAAGTAGATGATTACAAAAGCCCAAAGTTTTCTGGTTCAATTGATGCTTTCAAAAGAATTTCAGCTTCTGAGGGAATCAAAGGCCTTTATAAGGGTTTTGGTCCTGCAATGGCCCGAAGTGTTCCTGCTAATGCAGCTTGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGGGATGA 999 0.4725 MSVFSRIVNFIVMAIILSKLLILNLNPQFSFLVFQMGDVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQLPKYSGAIDAVKQTVAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEALLKSHPGATLTINQQVVCGAGAGVAVSFLACPTELIKCRLQAQSALAGTGTAAVAVKYGGPMDVARHVLRSEGGVKGLFRGLVPTMAREVPGNAAMFGVYEALKRLLAGGTDTSGLGRGSLMLAGGLAGAVFWLTVYPTDVVKSVIQVDDYKSPKFSGSIDAFKRISASEGIKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01360 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 137 233 IPR018108 -
Pumo8g01360 332 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 37 331 - -
Pumo8g01360 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 243 330 IPR018108 -
Pumo8g01360 332 Gene3D Mitochondrial carrier domain 135 332 IPR023395 -
Pumo8g01360 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 37 128 IPR018108 -
Pumo8g01360 332 Gene3D Mitochondrial carrier domain 2 134 IPR023395 -
Pumo8g01360 332 SUPERFAMILY Mitochondrial carrier 38 325 IPR023395 -
Pumo8g01360 332 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 39 331 - -
Pumo8g01360 332 Pfam Mitochondrial carrier protein 39 131 IPR018108 -
Pumo8g01360 332 Pfam Mitochondrial carrier protein 249 331 IPR018108 -
Pumo8g01360 332 Pfam Mitochondrial carrier protein 138 235 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01360 Pumo-Chr8 46079055 46080868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01360 57 326 Antiporters AT1G79900 32.852 1.44e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01360 K15109 - gmx:100787332 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01360 8 46079055 46080868 Pumo8g01360 8 46079055 46080868 ECH