Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo8g01345 | ATGATGGAGTTACCAGATATTTGGATATTAAGACTGGTTGTGGCATGTGCTATTTGTCTGCATATATTTATCAGATCGGCTTCTGCTACTGAAGGGTTTGAAAGTATAGCATGCTGTGCTGATTCAAATTACACAGATCCGCGAACCACCTTAAATTACACAACAGATTACAGATGGTTCCCTGATAAAGGAAGTTGCAGAAGAACTGAAAATGTGTTAAATGAAAAAGTTCGACTGTTTCTTATAGATAAAGGAAAGAGATGTTACAATTTGCCAACAATTAAGAATAAAGTATATCTGATAAGGGGCACATTTCCATTCGACAGTGTAAATTCTTCCTTTAATGTTTCAATCGGGGTAACACAATTAGGTGCAGTGAGATCATCCAGTCGCCAGGACTTGGAAATTGAGGGAATTTTCAGGGCTACCAAAGACTACATAGACTTCTGCTTAGTGAAGGGGGAGGTGGATCCCTTTATTTCTCAGCTTGAATTAAGGCCATTGCCTGAAGAGTACCTACATGATTTGCCTGCCAGTGTTTTAAAACTGATAAGCAGAAATAGTCTTTGGGACACAAAAGATGAAATCAGGTTCCCAATTGACCCAAGTGATAGAATCTGGAAAGCAACTTCAAGTCCATCAGCTGCTCTTGTGTTGTCTTCCAATGTTAGCAATTTTGACCTCAAATCCAATGTGACACCACCTCTACAAGTCCTACAAACAGCTCTTACCCACCCTGAGCGATTGCAGTTCAACCATAGTGGCCTTGACACTGAGGATTATGAATATCGTGTATTTGTCTACTTCCTTGAATTAAATAGCACTGTCAAAGCAGGCCAAAGGGTGTTTGACATCTATGTTAATGGTGAGATTAAAAAGGAGAGATTTGATATATTGGCTGGAGGGTCCAACTATACACACACTGTCTTGAACGTTTCAGCAAATGGATTACTTAATATAACCTTGGTCAAGGCATCTGGAGCTGAGTTTGGACCCCTTTTGAATGCTTATGAGATCCTGCAGATGCGATCATGGATTGAAGAGACCAACCAAAATGATGTGGAAGTGATTCAGAAGATTAGAGAAGAATTATTGTTGCAAAACCAAGACAATAAAGCCCTAAAGAGTTGGACTGGAGACCCTTGTTTTTTCCCCTGGCAAGGAATAACATGTGAAGGTTCAAATGGTTTGTCTGTTATCACTAAGCTGGATCTGTCCGCAAGTAATTTCAAAGGACCAATTCCTTCCAGTGTCACAGAGATGACCAACTTAAAACAATTGAACCTGAGCCACAACAATTTCGATGGTTATATCCCCTCATTTCCACTGTCTTCCTTGTTGATATCAATAGATCTGAGCTACAATGATCTTATGGGATCACTTCCAGAATCAATTGTCTCACTGCCACATTTAAAATCGTTGTATTTTGGCTGCAACAAACACATGAGCGAAGAGGATCCAGCAAATTTGAACAGTTCACTAATCCATACAGATTACGGAAGATGCAAAGCAAAAGAACCTAGGTTTGGACAAGTATTCGTCATTGGTGCCATTACATGTGGATCACTTTTGATTACTTTGGCCGTTGGAATCATTTTTGTTTGCCGCTATAGACAAAAGTTGATTCCATGGGAAGGATTTGGTGGAAAGAACTACTTGATGGAAACAAATGTAATATTCTCTTTACCAAGCAAAGATGATTTCTTAATGAAGTCCGTATCAATTCAAACATTCACTTTGGAAGATATAGAGGTGGCCACAGAAAGGTACAAAACTTTGATAGGGGAAGGAGGCTTTGGTTCTGTTTACCGGGGCACTCTAAACGACGGTCAAGAAGTGGCAGTGAAAGTCCGATCAGCGACATCAACTCAGGGAACAAGAGAATTTGATAATGAGCTAAACCTACTTTCTGCAACACAACATGAGAACCTGGTGCCTCTTCTTGGATACTGTAATGAAAATGATCAACAAATTATCGTGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTCTATGGGGAACCTGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTATTGCTCTTGGTGCAGCTCGAGGTTTGGCATATCTTCACACATTTCCAGGACGTTCAGTAATACACAGGGACGTGAAATCAAGCAATATACTTCTAGATCATAGCATGTGTGCTAAGGTTGCTGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTAATGTTTCCCTTGAAGTAAGAGGAACTGCAGGGTACCTGGATCCAGAATACTACAAAACCCAGCAACTATCTGAGAAGAGTGATGTCTTCAGCTTTGGCGTGGTTTTACTCGAAATTGTGAGTGGTAGGGAACCTCTCGACATTAAGAGACCCCGGAATGAGTGGAGTTTGTTTGAATGGGCCAAGCCATACATCAGAGCATCAAAGGTGGATGAAATTGTGGATCCTGGCATCAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAATGTCTTGAGCCCTTCTCAGAATATAGACCAAGCATGGTTGACGTTGTCCGCGAGTTAGAGGATGCTCTCATCATAGAAAACAATGCATCAGAATACATGAAGTCCATAGACAGCCTTGGAGGATCCAACCGCTACTCCATTGTCATAGAGAAAAGGGTGCTGCCCTCAACTTTATCAACAGCAGAATCAACCATCACAACCCAAGCCTTGTCCCACCCGCAGCCGAGATAG | 2754 | 0.4132 | MMELPDIWILRLVVACAICLHIFIRSASATEGFESIACCADSNYTDPRTTLNYTTDYRWFPDKGSCRRTENVLNEKVRLFLIDKGKRCYNLPTIKNKVYLIRGTFPFDSVNSSFNVSIGVTQLGAVRSSSRQDLEIEGIFRATKDYIDFCLVKGEVDPFISQLELRPLPEEYLHDLPASVLKLISRNSLWDTKDEIRFPIDPSDRIWKATSSPSAALVLSSNVSNFDLKSNVTPPLQVLQTALTHPERLQFNHSGLDTEDYEYRVFVYFLELNSTVKAGQRVFDIYVNGEIKKERFDILAGGSNYTHTVLNVSANGLLNITLVKASGAEFGPLLNAYEILQMRSWIEETNQNDVEVIQKIREELLLQNQDNKALKSWTGDPCFFPWQGITCEGSNGLSVITKLDLSASNFKGPIPSSVTEMTNLKQLNLSHNNFDGYIPSFPLSSLLISIDLSYNDLMGSLPESIVSLPHLKSLYFGCNKHMSEEDPANLNSSLIHTDYGRCKAKEPRFGQVFVIGAITCGSLLITLAVGIIFVCRYRQKLIPWEGFGGKNYLMETNVIFSLPSKDDFLMKSVSIQTFTLEDIEVATERYKTLIGEGGFGSVYRGTLNDGQEVAVKVRSATSTQGTREFDNELNLLSATQHENLVPLLGYCNENDQQIIVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLDIKRPRNEWSLFEWAKPYIRASKVDEIVDPGIKGGYHAEAMWRVVEVALQCLEPFSEYRPSMVDVVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTLSTAESTITTQALSHPQPR | 917 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo8g01345 | 917 | SUPERFAMILY | Protein kinase-like (PK-like) | 568 | 860 | IPR011009 | - | |
Pumo8g01345 | 917 | PANTHER | OS07G0107800 PROTEIN-RELATED | 35 | 864 | - | - | |
Pumo8g01345 | 917 | Pfam | Malectin-like domain | 40 | 341 | IPR024788 | - | |
Pumo8g01345 | 917 | Gene3D | Ribonuclease Inhibitor | 353 | 507 | IPR032675 | - | |
Pumo8g01345 | 917 | SMART | serkin_6 | 588 | 865 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo8g01345 | 917 | Gene3D | Phosphorylase Kinase; domain 1 | 560 | 663 | - | - | |
Pumo8g01345 | 917 | SUPERFAMILY | L domain-like | 367 | 490 | - | - | |
Pumo8g01345 | 917 | Pfam | Protein tyrosine and serine/threonine kinase | 592 | 860 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo8g01345 | 917 | FunFam | Calmodulin-binding receptor-like cytoplasmic kinase 3 | 664 | 880 | - | - | |
Pumo8g01345 | 917 | Gene3D | Transferase(Phosphotransferase) domain 1 | 664 | 877 | - | - | |
Pumo8g01345 | 917 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 710 | 722 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo8g01345 | 917 | Gene3D | - | 195 | 343 | - | - | |
Pumo8g01345 | 917 | ProSitePatterns | Protein kinases ATP-binding region signature. | 594 | 616 | IPR017441 | GO:0005524 | |
Pumo8g01345 | 917 | FunFam | Nodulation receptor kinase | 553 | 663 | - | - | |
Pumo8g01345 | 917 | CDD | STKc_IRAK | 594 | 861 | - | - | |
Pumo8g01345 | 917 | FunFam | Leucine-rich repeat receptor-like kinase | 352 | 485 | - | - | |
Pumo8g01345 | 917 | Pfam | Leucine rich repeat N-terminal domain | 351 | 391 | IPR013210 | - | |
Pumo8g01345 | 917 | ProSiteProfiles | Protein kinase domain profile. | 588 | 865 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo8g01345 | Pumo-Chr8 | 45863237 | 45870876 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo8g01345 | 10 | 867 | Receptor kinase-like Gene Family | AT1G67720 | 34.149 | 2.96e-131 | 416 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Pumo8g01345 | Malectin_like | 7.1e-46 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo8g01345 | - | - | gmx:100781986 | 1704.88 |