Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01345 ATGATGGAGTTACCAGATATTTGGATATTAAGACTGGTTGTGGCATGTGCTATTTGTCTGCATATATTTATCAGATCGGCTTCTGCTACTGAAGGGTTTGAAAGTATAGCATGCTGTGCTGATTCAAATTACACAGATCCGCGAACCACCTTAAATTACACAACAGATTACAGATGGTTCCCTGATAAAGGAAGTTGCAGAAGAACTGAAAATGTGTTAAATGAAAAAGTTCGACTGTTTCTTATAGATAAAGGAAAGAGATGTTACAATTTGCCAACAATTAAGAATAAAGTATATCTGATAAGGGGCACATTTCCATTCGACAGTGTAAATTCTTCCTTTAATGTTTCAATCGGGGTAACACAATTAGGTGCAGTGAGATCATCCAGTCGCCAGGACTTGGAAATTGAGGGAATTTTCAGGGCTACCAAAGACTACATAGACTTCTGCTTAGTGAAGGGGGAGGTGGATCCCTTTATTTCTCAGCTTGAATTAAGGCCATTGCCTGAAGAGTACCTACATGATTTGCCTGCCAGTGTTTTAAAACTGATAAGCAGAAATAGTCTTTGGGACACAAAAGATGAAATCAGGTTCCCAATTGACCCAAGTGATAGAATCTGGAAAGCAACTTCAAGTCCATCAGCTGCTCTTGTGTTGTCTTCCAATGTTAGCAATTTTGACCTCAAATCCAATGTGACACCACCTCTACAAGTCCTACAAACAGCTCTTACCCACCCTGAGCGATTGCAGTTCAACCATAGTGGCCTTGACACTGAGGATTATGAATATCGTGTATTTGTCTACTTCCTTGAATTAAATAGCACTGTCAAAGCAGGCCAAAGGGTGTTTGACATCTATGTTAATGGTGAGATTAAAAAGGAGAGATTTGATATATTGGCTGGAGGGTCCAACTATACACACACTGTCTTGAACGTTTCAGCAAATGGATTACTTAATATAACCTTGGTCAAGGCATCTGGAGCTGAGTTTGGACCCCTTTTGAATGCTTATGAGATCCTGCAGATGCGATCATGGATTGAAGAGACCAACCAAAATGATGTGGAAGTGATTCAGAAGATTAGAGAAGAATTATTGTTGCAAAACCAAGACAATAAAGCCCTAAAGAGTTGGACTGGAGACCCTTGTTTTTTCCCCTGGCAAGGAATAACATGTGAAGGTTCAAATGGTTTGTCTGTTATCACTAAGCTGGATCTGTCCGCAAGTAATTTCAAAGGACCAATTCCTTCCAGTGTCACAGAGATGACCAACTTAAAACAATTGAACCTGAGCCACAACAATTTCGATGGTTATATCCCCTCATTTCCACTGTCTTCCTTGTTGATATCAATAGATCTGAGCTACAATGATCTTATGGGATCACTTCCAGAATCAATTGTCTCACTGCCACATTTAAAATCGTTGTATTTTGGCTGCAACAAACACATGAGCGAAGAGGATCCAGCAAATTTGAACAGTTCACTAATCCATACAGATTACGGAAGATGCAAAGCAAAAGAACCTAGGTTTGGACAAGTATTCGTCATTGGTGCCATTACATGTGGATCACTTTTGATTACTTTGGCCGTTGGAATCATTTTTGTTTGCCGCTATAGACAAAAGTTGATTCCATGGGAAGGATTTGGTGGAAAGAACTACTTGATGGAAACAAATGTAATATTCTCTTTACCAAGCAAAGATGATTTCTTAATGAAGTCCGTATCAATTCAAACATTCACTTTGGAAGATATAGAGGTGGCCACAGAAAGGTACAAAACTTTGATAGGGGAAGGAGGCTTTGGTTCTGTTTACCGGGGCACTCTAAACGACGGTCAAGAAGTGGCAGTGAAAGTCCGATCAGCGACATCAACTCAGGGAACAAGAGAATTTGATAATGAGCTAAACCTACTTTCTGCAACACAACATGAGAACCTGGTGCCTCTTCTTGGATACTGTAATGAAAATGATCAACAAATTATCGTGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTCTATGGGGAACCTGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTATTGCTCTTGGTGCAGCTCGAGGTTTGGCATATCTTCACACATTTCCAGGACGTTCAGTAATACACAGGGACGTGAAATCAAGCAATATACTTCTAGATCATAGCATGTGTGCTAAGGTTGCTGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTAATGTTTCCCTTGAAGTAAGAGGAACTGCAGGGTACCTGGATCCAGAATACTACAAAACCCAGCAACTATCTGAGAAGAGTGATGTCTTCAGCTTTGGCGTGGTTTTACTCGAAATTGTGAGTGGTAGGGAACCTCTCGACATTAAGAGACCCCGGAATGAGTGGAGTTTGTTTGAATGGGCCAAGCCATACATCAGAGCATCAAAGGTGGATGAAATTGTGGATCCTGGCATCAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAATGTCTTGAGCCCTTCTCAGAATATAGACCAAGCATGGTTGACGTTGTCCGCGAGTTAGAGGATGCTCTCATCATAGAAAACAATGCATCAGAATACATGAAGTCCATAGACAGCCTTGGAGGATCCAACCGCTACTCCATTGTCATAGAGAAAAGGGTGCTGCCCTCAACTTTATCAACAGCAGAATCAACCATCACAACCCAAGCCTTGTCCCACCCGCAGCCGAGATAG 2754 0.4132 MMELPDIWILRLVVACAICLHIFIRSASATEGFESIACCADSNYTDPRTTLNYTTDYRWFPDKGSCRRTENVLNEKVRLFLIDKGKRCYNLPTIKNKVYLIRGTFPFDSVNSSFNVSIGVTQLGAVRSSSRQDLEIEGIFRATKDYIDFCLVKGEVDPFISQLELRPLPEEYLHDLPASVLKLISRNSLWDTKDEIRFPIDPSDRIWKATSSPSAALVLSSNVSNFDLKSNVTPPLQVLQTALTHPERLQFNHSGLDTEDYEYRVFVYFLELNSTVKAGQRVFDIYVNGEIKKERFDILAGGSNYTHTVLNVSANGLLNITLVKASGAEFGPLLNAYEILQMRSWIEETNQNDVEVIQKIREELLLQNQDNKALKSWTGDPCFFPWQGITCEGSNGLSVITKLDLSASNFKGPIPSSVTEMTNLKQLNLSHNNFDGYIPSFPLSSLLISIDLSYNDLMGSLPESIVSLPHLKSLYFGCNKHMSEEDPANLNSSLIHTDYGRCKAKEPRFGQVFVIGAITCGSLLITLAVGIIFVCRYRQKLIPWEGFGGKNYLMETNVIFSLPSKDDFLMKSVSIQTFTLEDIEVATERYKTLIGEGGFGSVYRGTLNDGQEVAVKVRSATSTQGTREFDNELNLLSATQHENLVPLLGYCNENDQQIIVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLDIKRPRNEWSLFEWAKPYIRASKVDEIVDPGIKGGYHAEAMWRVVEVALQCLEPFSEYRPSMVDVVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTLSTAESTITTQALSHPQPR 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01345 917 SUPERFAMILY Protein kinase-like (PK-like) 568 860 IPR011009 -
Pumo8g01345 917 PANTHER OS07G0107800 PROTEIN-RELATED 35 864 - -
Pumo8g01345 917 Pfam Malectin-like domain 40 341 IPR024788 -
Pumo8g01345 917 Gene3D Ribonuclease Inhibitor 353 507 IPR032675 -
Pumo8g01345 917 SMART serkin_6 588 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01345 917 Gene3D Phosphorylase Kinase; domain 1 560 663 - -
Pumo8g01345 917 SUPERFAMILY L domain-like 367 490 - -
Pumo8g01345 917 Pfam Protein tyrosine and serine/threonine kinase 592 860 IPR001245 GO:0004672|GO:0006468
Pumo8g01345 917 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 664 880 - -
Pumo8g01345 917 Gene3D Transferase(Phosphotransferase) domain 1 664 877 - -
Pumo8g01345 917 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Pumo8g01345 917 Gene3D - 195 343 - -
Pumo8g01345 917 ProSitePatterns Protein kinases ATP-binding region signature. 594 616 IPR017441 GO:0005524
Pumo8g01345 917 FunFam Nodulation receptor kinase 553 663 - -
Pumo8g01345 917 CDD STKc_IRAK 594 861 - -
Pumo8g01345 917 FunFam Leucine-rich repeat receptor-like kinase 352 485 - -
Pumo8g01345 917 Pfam Leucine rich repeat N-terminal domain 351 391 IPR013210 -
Pumo8g01345 917 ProSiteProfiles Protein kinase domain profile. 588 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01345 Pumo-Chr8 45863237 45870876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01345 10 867 Receptor kinase-like Gene Family AT1G67720 34.149 2.96e-131 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pumo8g01345 Malectin_like 7.1e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01345 - - gmx:100781986 1704.88