Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01336 ATGATGATATCAAACAATATAGATAATGCTCCCACTCAGTTCCTTCTCAGTGTTGTGAATGGAATTCTTGAAGAAAGTGTTGAAAGAAAAAATGGGGAAATACCTCATCAAAACAATCTTTTTAAGGCTCGGGAAGAAAAATACAAATCAAGAATAAGAGTACTCGAGGCACTTGCCTATGGAACTAAGTTCCCTACAGGTACACCTACAAATGTGTTAATGTCAATGTTATCTTGGAAATGTCAAACATTACAATTTTGTACTGAATTTGCAAACATCCAGAAATTGAAATTATCTTGGGAATCCATTAAGCAAAATGTTATGAAAGAGCAAACCGTTTATGCAGAGGATTGTGCTCGATTAGGTGTTTATCTTAAACCACTGCTACATGCAGCTGAGAACTACCATGCTGCTCCTGCTGAAAATCAAAAAATGTTTAACGAGATTCAAGAATTAAAAGGTGGAAATATCAGAGTATATTGTCAAATTAGACCATTTCTTTCAGGCAAAAAGGAAAAAGAGTCTATTGTTGAACACATTGGTGAAAACGATTTGGTTGTGGTAAATCCATCCAAAGAAGGAAAAGATGCCCATCGATCATTTAAATTTAATAAGGTTTTCGGCCATGCCAAAACTCAAGGGGAGGTATACTCTGACATCCAATCCTTTATAAGATCAGTACTGGATGGGCATAATGTGTGTCTATTTGCTTATGGCCAAACTGGCACATGGAAAACTTATACAATGACTGGTCCAAGTGGGGCAGAAAGCGAGACTATTGGTGTCAATTATCGAGTTCTAAATGACCTCTTCAGGATTTCCACAAGTAGAGAAGGCTTCATTGACTATGAGATTGGGGTTCAAATGGTTGAGATATATAATGAGCAAGTCCGTGACTTGTTAATGACAGATGTTGGGATATTGACGCAATCTCAACCAAATGGCTTAGCAGTACCCGATGCTAGCTTGTTCCCTGTGAAAACGTCTTCAGATGAGATTAAGCTAATGGACATTGGACTTAAAAATGGAGCCATTGTTGCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTTGTCTCGATTCATGTTTGTGGGAAGGACTTGAAGACTGGTTCTATCATGGTTGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGTTTTGGAGTAACTGGGGATAGGCTTAAGGAAGCACAACATATAAACAAATCACTATCTGCCCTTGGAGATGTTATTTTTGCCCTTTCTCAAAAGAGCCCTCACGTACCATACAGAAACAGCAAGCTTACTCAACTTTTACAAACTTCTCTTGGTGGTCAAGCAAAGACACTCATGTTTGTCCAAATTAATTCAGACATAAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGACGGTTTCTAGAGTTGAATTAGGAGCTGCACGAAGTAGCAAAGAGAGCAAAGATGTCAGAGAATTAAAGGAACAGCAAAACAATCTTTTTAAGGCTCGGGAAGAAAAATACAAATCAAGAATAAGAGTACTCGAGGCACTTGCCTATGGAACTAAGAAATTGAAATTATCTTGGGAATCCATTAAGCAAAATGTTATGAAAGAGCAAACCGTTTATGCAGAGGATTGTGATCGATTAGGTGTTTATCTTAAACCACTGCTACATGCAGCTGAGAACTACCATGCTGCTCTTGCTGAAAATCAAAAAATGTTTAACGAGATTCAAGAATTAAAAGGTGGAAATATCAGAGTATATTGTCGAATTAGACCATTTCTTTCAGGCAAAAAGGAAAAACAGTCTATTGTTGAACACATTGGTGAAAATGATTTGGTTGTGGTAAATCCATCCAAAGAAGGAAAAGATGCCCATCGATCATTTAAATTTAATAAGGTTTTCGGCCATGCCACAACTCAAGATGCCATTTTTTCTCAGACTGGTCCAAGTGGGGCAGAAAGTGAGACTGTTGGTGTCAATTATCGAGCTCTAAATGACCTCTTCAGGATTTCCTCAAGTAGAGAAGGCTTCATTGACTATGAGATTGGGGTTCAAATGGTTGAGATATATAATGAGCAAGTCCGTGACTTGTTAATGACAGATGTTGGGATATTGACTCGATCTCAACCAAATGGCTTAGCAGTACCCGGTGCTAGGTTGTTCCCTGTGAAAACGTCTTCAGATGTGATTAAGCTAATGGACATTGGACTTAAAAATAGAGCCATTGGTGCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTTGTCTCGATTCATGTTTGTGGGAAGGACTTGAAGACTGGTTCTACCATGGTTGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGTTCTGGAGTAACTGGGGATAGGCTTAAGGAAGCACAACATATAAACAAATCACTATCTGCCCTTGGAGATGTTATTTTTGCCCTTTCTCAAAAGAGCCCTCACGTACCATACAGAAACAGCAAGCTTACTCAACTTTTACAAACTTCTCTTGGTGGTCAAGCAAAGACACTCATGTTTTTCCAAATTAATTCAGACATAAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGGGTTTCTAGAGTTGAATTAGGAGCTGCACGAAGTAGCAAAGAGAGCAAAGATGTCAGAGAATTATTTTACGCTAATTAA 2703 0.384 MMISNNIDNAPTQFLLSVVNGILEESVERKNGEIPHQNNLFKAREEKYKSRIRVLEALAYGTKFPTGTPTNVLMSMLSWKCQTLQFCTEFANIQKLKLSWESIKQNVMKEQTVYAEDCARLGVYLKPLLHAAENYHAAPAENQKMFNEIQELKGGNIRVYCQIRPFLSGKKEKESIVEHIGENDLVVVNPSKEGKDAHRSFKFNKVFGHAKTQGEVYSDIQSFIRSVLDGHNVCLFAYGQTGTWKTYTMTGPSGAESETIGVNYRVLNDLFRISTSREGFIDYEIGVQMVEIYNEQVRDLLMTDVGILTQSQPNGLAVPDASLFPVKTSSDEIKLMDIGLKNGAIVATAMNERSSRSHSVVSIHVCGKDLKTGSIMVGNLHLVDLAGSERVDRFGVTGDRLKEAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDISSYSETLSTLKFAETVSRVELGAARSSKESKDVRELKEQQNNLFKAREEKYKSRIRVLEALAYGTKKLKLSWESIKQNVMKEQTVYAEDCDRLGVYLKPLLHAAENYHAALAENQKMFNEIQELKGGNIRVYCRIRPFLSGKKEKQSIVEHIGENDLVVVNPSKEGKDAHRSFKFNKVFGHATTQDAIFSQTGPSGAESETVGVNYRALNDLFRISSSREGFIDYEIGVQMVEIYNEQVRDLLMTDVGILTRSQPNGLAVPGARLFPVKTSSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVCGKDLKTGSTMVGNLHLVDLAGSERVDRSGVTGDRLKEAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGGQAKTLMFFQINSDISSYSETLSTLKFAERVSRVELGAARSSKESKDVRELFYAN 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01336 900 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 503 IPR027417 -
Pumo8g01336 900 SMART kinesin_4 585 887 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01336 900 SMART kinesin_4 154 486 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01336 900 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 97 480 - -
Pumo8g01336 900 Pfam Microtubule binding 572 650 IPR031852 GO:0008017
Pumo8g01336 900 Gene3D Kinesin motor domain 529 881 IPR036961 -
Pumo8g01336 900 Gene3D Kinesin motor domain 98 480 IPR036961 -
Pumo8g01336 900 Pfam Kinesin motor domain 164 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01336 900 Pfam Kinesin motor domain 655 879 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01336 900 ProSiteProfiles Kinesin motor domain profile. 156 478 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01336 900 ProSiteProfiles Kinesin motor domain profile. 587 879 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01336 900 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 587 887 IPR027417 -
Pumo8g01336 900 PRINTS Kinesin heavy chain signature 230 251 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01336 900 PRINTS Kinesin heavy chain signature 379 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01336 900 PRINTS Kinesin heavy chain signature 428 449 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01336 900 PRINTS Kinesin heavy chain signature 348 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo8g01336 900 PANTHER KINESIN-LIKE PROTEIN KLP-3 11 499 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01336 Pumo-Chr8 45620332 45628179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01336 574 879 Calmodulin-binding Proteins AT5G65930 36.176 2.49e-49 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01336 K10406 - gmx:100819914 685.256