Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01334 ATGGCGTCACAACCAGAGATGGAGCATCCCAAGAAGGCTTTTGGATGGGCAGCTCGGGACTCATCTGGGATTCTCTCCCCTTTCAACTTCTCCAGAAGGAAAACGGGTGAGAAAGACGTGGCATTCAAAGTACACTACTGTGGAATATGCCACTCGGACCTGCATATGTTAAAGAACGAGTGGGGCAACGCAATCTATCCTCTGGTTCCTGGAATAACGTATTACCTTCTCACAAAAAGAGAAGGGGAAAAACGTGAAATAAGAGATAACAATGCAATGGGAAAAGGACCCATGTTTGCATATCTTAATCAAGTTTTTTGTTTAGCCTTTGGATATGTGGCTGTAATGGGAACCATGGATGGTATCATTGACACAGTTTCTGCTGTCCATCCTCTTGTGCCTTTGATTGGCCTGTTGAAGCCTCATGGTAAACTTGTTATGGTTGGTGCACCGGAGAAACCTCTGGAGGTGCCAACACATTCTTTAGTTCAGGGGAGGAAGTTGATGGGTGGCAGTTGCATCGGAGGGATGAAGGAGACGCAAGAAATGCTTGATTTTGCTGCTAAGCATGGTGTGAAACCTGATATTGAGGTTGTTCCAATAGATTATGTGAATACTGCAATGGAGCGCCTCCAGAAAGCTGATGTGAAGTATCGATTTGTAATTGACATTGCAAACACGTTGAAGGCAAGTTCTTGA 699 0.4478 MASQPEMEHPKKAFGWAARDSSGILSPFNFSRRKTGEKDVAFKVHYCGICHSDLHMLKNEWGNAIYPLVPGITYYLLTKREGEKREIRDNNAMGKGPMFAYLNQVFCLAFGYVAVMGTMDGIIDTVSAVHPLVPLIGLLKPHGKLVMVGAPEKPLEVPTHSLVQGRKLMGGSCIGGMKETQEMLDFAAKHGVKPDIEVVPIDYVNTAMERLQKADVKYRFVIDIANTLKASS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01334 232 Gene3D - 115 194 - -
Pumo8g01334 232 FunFam Putative cinnamyl alcohol dehydrogenase 6 113 194 - -
Pumo8g01334 232 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 116 193 IPR036291 -
Pumo8g01334 232 SUPERFAMILY GroES-like 8 72 IPR011032 -
Pumo8g01334 232 FunFam Putative cinnamyl alcohol dehydrogenase 6 195 224 - -
Pumo8g01334 232 Gene3D - 195 222 - -
Pumo8g01334 232 Gene3D - 2 73 - -
Pumo8g01334 232 Pfam Alcohol dehydrogenase GroES-like domain 38 71 IPR013154 -
Pumo8g01334 232 PANTHER ALDEHYDE REDUCTASE 114 227 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01334 Pumo-Chr8 45557675 45565017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01334 11 71 Monolignol Biosynthesis Gene Families AT4G37990 75.410 5.23e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01334 K23232 - gmx:100809071 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01334 8 45557675 45565017 Pumo8g01334 8 45557675 45565017 ECH