Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01328 ATGGGACAACACCAGGCCAGGCCAAGTCAGGCCTTTGACGGGCTAGGCTGCAGGTCCCTGACCATTGAAATGGCAACACAAGCTGAAACTGAGCATCCTAGGAAGGCATTCGGATGGGCAGCTAGGGATACTTCTGGTCTTCTCTCCCCTTTCAACTTCTCCAGAAGGAAAACTGGTGAAAAAGATGTGGCATTCAAAGTGTTGTATTGTGGGATATGTCACTCTGACCTCCACATGGTGAAGAACGAATGGGGCTCTTCCACCTATCCACTAGTCCCCGGGCATGAGGTAGTTGGTGTAGTGACAGAGGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGGGACAAGGTCGGTGTGGGATGCTTGGTTGATTCTTGCCGCACCTGCCAAAACTGTGCTGACAATCTTGAGAATTATTGTCCGAAATATACGCTCACATATGGTGCCAAGCATAAAGATGGTACCATGACATATGGAGGCTACTCTGACTCAATGGTTGCAGACGAACACTTTGTGGTTCGCATTCCTGATGGCTTACCACTTGATGCTGCTGCACCTCTCCTTTGTGCTGGCATCACTGTGTATAGCCCTCTCAGATATTTTGCACTAGACAAGCCTGGTCTACATCTGGGTGTTGTTGGTCTTGGAGGACTAGGCCATGTGGCTGTGAAGTTTGCCAAAGCTTTTGGGGCTAAGGTCACAGTGATAAGTACATCACCCAACAAAAAGGAGGAAGCAATACAACATCTTGGAGCTGACTCTTTTCTTATAAGCCGTGACCAAGATCAGATGCAGTCTGCAATGGGCACTTTGGATGGTATTATTGACACAGTTTCTGCTGTTCATCCTCTCTTACCTCTCATTGGTTTACTCAAGTCTCATGGAAAGCTTGTAATGGTCGGTGCACCAGAGAAGCCTCTAGAGCTTCCAGTCATTCCTTTAATTATGGGGAGAAAGACAGTAGCTGGGAGTGGCATTGGAGGGATGAAGGAGACCCAAGAGATGATTGACTTTGCTGCCGAACACAATGTAAAACCGGACATTGAGGTCATTCCTGTTGATTATGTCAACACAGCAATGGAGCGTCTCCTCAAAGCAGATATAAAATATAGATTTGTGATTGACATTGGAAACACATTAAAATCAAACTCTTGA 1155 0.4641 MGQHQARPSQAFDGLGCRSLTIEMATQAETEHPRKAFGWAARDTSGLLSPFNFSRRKTGEKDVAFKVLYCGICHSDLHMVKNEWGSSTYPLVPGHEVVGVVTEVGSKVEKFKVGDKVGVGCLVDSCRTCQNCADNLENYCPKYTLTYGAKHKDGTMTYGGYSDSMVADEHFVVRIPDGLPLDAAAPLLCAGITVYSPLRYFALDKPGLHLGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKKEEAIQHLGADSFLISRDQDQMQSAMGTLDGIIDTVSAVHPLLPLIGLLKSHGKLVMVGAPEKPLELPVIPLIMGRKTVAGSGIGGMKETQEMIDFAAEHNVKPDIEVIPVDYVNTAMERLLKADIKYRFVIDIGNTLKSNS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01328 384 SUPERFAMILY GroES-like 44 207 IPR011032 -
Pumo8g01328 384 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 94 108 IPR002328 GO:0008270|GO:0016491
Pumo8g01328 384 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 179 345 IPR036291 -
Pumo8g01328 384 FunFam Cinnamyl alcohol dehydrogenase 190 346 - -
Pumo8g01328 384 Gene3D - 190 346 - -
Pumo8g01328 384 FunFam Uncharacterized protein 39 189 - -
Pumo8g01328 384 PANTHER ALDEHYDE REDUCTASE 29 379 IPR047109 GO:0016616
Pumo8g01328 384 Pfam Alcohol dehydrogenase GroES-like domain 61 174 IPR013154 -
Pumo8g01328 384 FunFam Putative cinnamyl alcohol dehydrogenase 6 347 376 - -
Pumo8g01328 384 Gene3D - 39 376 - -
Pumo8g01328 384 SMART PKS_ER_names_mod 46 374 IPR020843 GO:0016491
Pumo8g01328 384 Pfam Zinc-binding dehydrogenase 217 340 IPR013149 -
Pumo8g01328 384 CDD CAD1 37 375 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01328 Pumo-Chr8 45387794 45441834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01328 34 383 Monolignol Biosynthesis Gene Families AT4G37990 74.000 4.22e-180 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01328 K23232 - gmx:100816901 608.601