LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo8g01307	ATGGATGCAATCCAAACAGAGAAAGTTTATGTTGCTGTTTGTAATGATGCGCAGGATGGATTTAAGACTTTGAATTGGGCTCTCAAGAAGTGGAATTCTCATCCAATTTCCATTGTTATTCTCCATGTGACACACAATAGTACCAAGGATTATGTCCATACACCATTTGGGAAACTTCCAGCAAGATCTGTGAGTGAGGAGAAACTACAAATTCTCAGGAAAGATGAGCAGGATAAAATCAACAAGCTGCTTTCCAAGTATATTGCTTTCTGTGGCAAGGTGCCAGCAGAGATTCTTGAAGTTGAGAAATTTGATGAACCTATGCAAAAGCGCGTCATAGACTTGATCTTTGGTCTAGGAATAACCAAATTGGTCATGGGATTTTCATTCATGAAGCCCTCCATGAAATCTAAAGGTGCTATTAGTGGATTGTTCTATGTTCATCAGCACAAGCCTTCCTTCTGTGAATTATTCATTATTTGTGGGGGGAAGCAAGTTTTCCTCAGAGGGAAGAATGATGAGAAAATCATGGAGGATGATCATGGGGTCATGGTTGCCAGAATGAGAGATAAGATAACTTTCAAAGATTGGTTAGACAAATGGTTCAATGACAAAACCAACGATTCACAAGATAGGAGTGCATCACTTTCCTCATCCAATTTGGAGTCCCCTGTGAACCGAAACCAGTGGGAATTTTACCTCCAGGAAATTGAAAATTACTATCAAGAATTGTTGTCTTCCTAA	744	0.3938	MDAIQTEKVYVAVCNDAQDGFKTLNWALKKWNSHPISIVILHVTHNSTKDYVHTPFGKLPARSVSEEKLQILRKDEQDKINKLLSKYIAFCGKVPAEILEVEKFDEPMQKRVIDLIFGLGITKLVMGFSFMKPSMKSKGAISGLFYVHQHKPSFCELFIICGGKQVFLRGKNDEKIMEDDHGVMVARMRDKITFKDWLDKWFNDKTNDSQDRSASLSSSNLESPVNRNQWEFYLQEIENYYQELLSS	247

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo8g01307	247	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	6	178	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo8g01307	Pumo-Chr8	45209284	45210349	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo8g01307	5	246	U-box Gene Family	AT5G65500	52.439	9.10e-69	224

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo8g01307	-		-	gmx:100786771	468.003