Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01297 ATGGCTCTTCCTGGTTCCCTGCAGTTGTCCCATGGATTGGGACTTTGCAGGAACCTGGACTGCAATAAACATTCGGGAGCAACGGGACGTGGCAAGTTACATTTATTTAGTGCAGGTCCTTCATATCCTATTTCGTTCATGAGACAGGAATGCAGGGGTTTTCAACACCTTCGTCATATAAACAGGCCAACACATACATTATCTTGCAAATCCCGCTCTTTTAAGTGTCATTGTTTTTTAGTGTCAGGTCAACCAAATGAGCTTCCTGCTGTTAAGGTGGCTGCTACAGTGTTGGCTAGGTCTTGTAATGTGTTACAAAATAGTCCCATCATAGTAAAGTTGATTCCTGCAGTTGGTGTTATCATTTTTGCATTATGGGGTGTTGGTCCGTTGTTGTTTCAGACAAGGAAATTACTTTTTCAGAGGAGTGATAGTAGTTGGAAGAAAAGTACCACTCACTATATAGTAACCTCTTACATTCAGCCATTATTGTTATGGACTGGAGCAATACTTATATGCAGAGCATTGGAGCCATTAATTCTACCTTCAGAAACTAGCCAGGTTGTTAAGGAACGGCTTTTGAATTTTGTAAAATCATTGTCAACAGTACTGGCCTTCGCCTATTGTTTGTCAAGTGTAATTCAGCAAGCACAGAAGTTCTTAGCAGAGAGTACTGATGCAAGTGAGGCGAGAAATATGGGATTCCAATTTGCTGGCAAAGCTGTTTATTCTGCGGTATGGATTGCTGCCTTTTCACTGTTCATGGAATTGCTGGGCTTCTCTACCCAGAGATGGGTTACTGCAGGAGGTCTTGGGACAGTTTTGTTGACCCTTGCAGGTCGTGAGATATTTACAAACTTCCTTTCGAGTGTGATGATTCATGCAACTCGGCCTTTTGTGGTTAATGAATGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACTGTTGAGCATGTTGGCTGGTGGTCGCCAACAATTATTAGAGGTGAAGATCGTGAAGCTGTTCACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGGAACCTTAGTCAAAAAACACATTGGCGAATCAAAACCCATCTAGCCATTAGTCATTTGGATGTAAATAAAATTAATAACATTGTTGCTGACATGAGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGAAGAGTGTTTTTGGACAACATAAATCCTGAAAATCAGGCTCTTTTGATTCTGGTGCTCTTGTTTTGTTAA 1263 0.4101 MALPGSLQLSHGLGLCRNLDCNKHSGATGRGKLHLFSAGPSYPISFMRQECRGFQHLRHINRPTHTLSCKSRSFKCHCFLVSGQPNELPAVKVAATVLARSCNVLQNSPIIVKLIPAVGVIIFALWGVGPLLFQTRKLLFQRSDSSWKKSTTHYIVTSYIQPLLLWTGAILICRALEPLILPSETSQVVKERLLNFVKSLSTVLAFAYCLSSVIQQAQKFLAESTDASEARNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQRWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVLLFC 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01297 420 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 419 IPR045042 -
Pumo8g01297 420 Gene3D - 299 354 IPR023408 -
Pumo8g01297 420 Gene3D - 193 297 - -
Pumo8g01297 420 Pfam Mechanosensitive ion channel 240 412 IPR006685 GO:0016020|GO:0055085
Pumo8g01297 420 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01297 Pumo-Chr8 45145370 45150785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01297 9 419 Mechanosensitive Ion Channel Family AT5G10490 66.747 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01297 K22047 - gmx:100789444 802.742