Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01294 ATGAGAACTTTGAAGGAGTGGTTCACATCGTCGCAAGCTTTATTAAGCATGTTACTAGTGCAAGTTTTTGCAACTGGGACGCAACTACTATCAAGGGTCATTTTGGTTGAGGGCACTTTTGTCTTTGCACTCATTGCCTATCGCCATATTGTTGCTACCATCTGTGTTGCCCCCTTTGCACTCTACTTCGAAAGAGACCAGACAAAGAAGTTCACTTGGAAAGTTTGTTTTTGGCTTTTCATTAATGCATTAACAGGGATAACTATGGCTCAAGGATTGTTTTATTATGGTTTGCGAGACACTTCAACTACTTATGCTACTAGCTTTCTTAACTTGATTCCTATATGCACTTTCCTTACCTCTATCATATTTAGAATGGAGACATTGGGGTTGCAAACATGGGGAGGTAAAGCTAAGTTTGTAGGGACAATTTTGTGTATTGGGGGAGCATTAGTTACTTGTCTTTACAAAGGGAAGGAATTTTATCTTACTCCTTATAGTCATTACACTCACACTGTTGTTGTGGCTCACAAAAGTAACATGCTTAGGGGCACTTTCTTTTTGGTTTGTTGTTGCTTCTCATACACAGCTTGGTTTATTGCACAAGTCAAGTTGCTTGAAGTGTTTCCATTGAGGTATTGGGGAACAATGTTAGCATGCGTTGCGGCAACAATCCAATCAGCAATTCTAGGTGCATTCATAGATTCAAGTAAAAATGCATGGAAATTAGAATGGAATCTACAGTTGATCACTATAGTGTATTCGGGAGCATTGGCTACGGGTGCTACATTTTGCTTAATACTGTGGGTAATTAAAGTCAAAGGACCTACTTATCCTCCAATTTTCAATCCACTTGTTCTTATTTTTGTGGCCTTATTAGAAGCTATCTTACTTGGTGAGTCATTGGGAGTTGGAACGTTGTTGGGCATGGTTTTGATCATAGTGGGATTGTACTCCTTTTTGTGGGGCAAAATGACTGAGACACAGCACAATGTAGCAGCTGCAGAAGAGTCAATGGGATCTTACTATCCAGTTGGATGCGAGGATATGAGGGCACCCTTAGGATCAGAACGTGTCTAG 1080 0.4028 MRTLKEWFTSSQALLSMLLVQVFATGTQLLSRVILVEGTFVFALIAYRHIVATICVAPFALYFERDQTKKFTWKVCFWLFINALTGITMAQGLFYYGLRDTSTTYATSFLNLIPICTFLTSIIFRMETLGLQTWGGKAKFVGTILCIGGALVTCLYKGKEFYLTPYSHYTHTVVVAHKSNMLRGTFFLVCCCFSYTAWFIAQVKLLEVFPLRYWGTMLACVAATIQSAILGAFIDSSKNAWKLEWNLQLITIVYSGALATGATFCLILWVIKVKGPTYPPIFNPLVLIFVALLEAILLGESLGVGTLLGMVLIIVGLYSFLWGKMTETQHNVAAAEESMGSYYPVGCEDMRAPLGSERV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01294 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 324 - -
Pumo8g01294 359 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020
Pumo8g01294 359 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020
Pumo8g01294 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Pumo8g01294 359 PANTHER WAT1-RELATED PROTEIN 14 328 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01294 Pumo-Chr8 45107788 45110207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01294 15 348 Nodulin-like Gene Family AT1G09380 33.521 4.21e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01294 - - gmx:100782551 510.76