Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01288 ATGGATCCGCACACAGGATCCGGATCCGGCTCCGGCTCCGGCTCCGAACCCGAAAACCCTATCGCCACGTGTCTTTCCATGCTCGCCCTCCGCCGCTTCTCCGAGTGCCGCGACTTCGCCCGCCGCCTCCCACCCTCCGACTCCGTCGCCCGCATCCTCGCCGTCGCCGACGTCCTCTCCGCCGCCGACTTCTACTCCGTCCTCCAGCTCCGCCCCTCCGACGGCGGCAACCGCGACCTCGCGCGGCGGCAGTACGCGAAACTCGCACTCCTCCTCGACCCGACGAACCCCGACAAGTTCCCGTTCTCCGACGAGGCCCTCGCACGTGTCCAGGACGCCTGGCACGTGCTCTCCCACCCCGAACGCCGCGCCCTCCACGACCGCGAGCAAGGGGTAAACGCAAACCTAAACCCTACAACGACGACGTCGTTTTGGACCGCGTGCCCCTACTGCTGGAACCTCTTCGAGTACGAGAAGAGGTACGAGGATTGCTCGCTGCTGTGCCACGTTTGCGGGAAGGCGTTCCAGGGCGTGGCGGTGAAGCCGCCAACGAAGATGGGCGACGCGGTGGTGGAGGGGGAGGAGCTCCGGCAGTACTACTCGTGTGAGGCGAGTGTGCCTTTGATGTATTATGAAGTTAAGGAGAAGAATATGGGTAACAATGTATTGGGTGGACAAAATGGTGCACAATATGTGTGCATTTCTGATGATGAAGGGTGTGTGAGAAATGAAGGGTTGCAAGGCAGTGGTGAGAAGAGGAGGATGAGGGTGAAGACTGTGGCGAACAAGGTTGGTGGGAACAGGATGAGGAGGCCTCTTGATAGTGACTCGGATTTGGATTTGGATGTGGATGATGGGGAATTGGAGTTCACGGAAGGAGATGATGATGTCTTTGTTGGTGTGAGGTTTGACAAGTGA 918 0.598 MDPHTGSGSGSGSGSEPENPIATCLSMLALRRFSECRDFARRLPPSDSVARILAVADVLSAADFYSVLQLRPSDGGNRDLARRQYAKLALLLDPTNPDKFPFSDEALARVQDAWHVLSHPERRALHDREQGVNANLNPTTTTSFWTACPYCWNLFEYEKRYEDCSLLCHVCGKAFQGVAVKPPTKMGDAVVEGEELRQYYSCEASVPLMYYEVKEKNMGNNVLGGQNGAQYVCISDDEGCVRNEGLQGSGEKRRMRVKTVANKVGGNRMRRPLDSDSDLDLDVDDGELEFTEGDDDVFVGVRFDK 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01288 305 Gene3D DnaJ domain 58 130 IPR036869 -
Pumo8g01288 305 CDD DnaJ 63 118 IPR001623 -
Pumo8g01288 305 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Pumo8g01288 305 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 12 220 - -
Pumo8g01288 305 Pfam DnaJ domain 63 127 IPR001623 -
Pumo8g01288 305 SUPERFAMILY Chaperone J-domain 57 129 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01288 Pumo-Chr8 44997342 44998581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01288 16 188 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 33.628 5.85e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01288 - - gsj:114406356 453.366