Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01264 ATGTTCGGACCACCCCAACCCGATTCCAAACCTCCCAATTCCACTCTCAAATTCCTCTGCAGCTACGGCGGCAAAATCCTCCCTCGCTACCCCGACGGCAAGCTCCGCTACCTCGGCGGCCACACCCGCGTCCTCGCCGTCGACCGCTCCATCCCATTCTCCGAGCTATTGCTGAAGCTGGAAGAGCTCTGCGGCGCCTCCGTGAGGCACCTCCGCTGCCAATTACCCTCCGAAGACCTCGACGCTCTTGTCTCCATAACCTCCGACGAAGATCTCGCCAACCTCATCGAGGAATACGACCGCGTTTCGTCCCTCAAAATCAGAGCCTTCCTCTCGCCGCCAACGCCGCCGAGATCGCCGAACAAGGTGTCCACTCCTCCGTCGAAATCGGCGTCCATCTCTTCCTCCTCCGCTTCGTCGTCGTCGTCGTCTTCATCGTATTGCAGTCCTACTACCGGCGGTTCTGGCCGGAGGTATATGACTTCGGCGCCGGTGTCCGACCGCTGCGTACATCAGATGTCGCCGCCGCCGGTGTATCCGGTCGGCTTGGAGAAATCGAAATCCTCCGGGAGGAATATTCCTCTGCCGCGGTACGGTTACCACCACGGGAACGGTGGACACGTTTATCTGATCCACAACGGGAACCACTGGCAATAG 657 0.5982 MFGPPQPDSKPPNSTLKFLCSYGGKILPRYPDGKLRYLGGHTRVLAVDRSIPFSELLLKLEELCGASVRHLRCQLPSEDLDALVSITSDEDLANLIEEYDRVSSLKIRAFLSPPTPPRSPNKVSTPPSKSASISSSSASSSSSSSSYCSPTTGGSGRRYMTSAPVSDRCVHQMSPPPVYPVGLEKSKSSGRNIPLPRYGYHHGNGGHVYLIHNGNHWQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01264 218 MobiDBLite consensus disorder prediction 124 159 - -
Pumo8g01264 218 SUPERFAMILY CAD & PB1 domains 32 117 - -
Pumo8g01264 218 MobiDBLite consensus disorder prediction 111 190 - -
Pumo8g01264 218 Pfam PB1 domain 32 113 IPR000270 GO:0005515
Pumo8g01264 218 Gene3D - 34 112 - -
Pumo8g01264 218 PANTHER OS05G0427100 PROTEIN-RELATED 8 189 - -
Pumo8g01264 218 SMART PB1_new 30 114 IPR000270 GO:0005515
Pumo8g01264 218 CDD PB1_UP2 19 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01264 Pumo-Chr8 44500660 44502363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01264 16 111 MAP Kinase Kinase Kinase AT5G57610 52.475 4.09e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01264 - - gmx:100810685 349.362