Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01262 ATGGATATTAGTTCAAACATCAGATATGGATGTACTCGAGATGTAAAGCAGGAGGATATTGAATGGGCTGCAAAGCAGGCCTATGCCCATGACTTTATCTCAGCACTTCCCAATGGTTATGAAACACTTGTTGATGATGATCTGTTAAGTGGAGGACAAAAGCAGCGAATTGCTATTGCTAGGGCCCTTCTAAGGGACCCAAAAATATTGATCCTTGATGAAGCCACTAGTGCACTAGATGCTGAAAGTGAGCATAATGTCAAGGGTGTTCTTCGATCTGTTAGAAGTGATTCTGCAACTAGAAGTGTCATAGTCATTGCACACAGGCTTTCTACCATACAAGCAGCTGACAGGATTGTGGTGATGGATGGTGGTCAAATTGTTGAGATGGGAAGTCACAGGGAACTTCTCTTAAAAGATGGTTTGTATGCACGGCTAACCAGAAAACAGGCTGATGCCATGGCATGA 468 0.4316 MDISSNIRYGCTRDVKQEDIEWAAKQAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARALLRDPKILILDEATSALDAESEHNVKGVLRSVRSDSATRSVIVIAHRLSTIQAADRIVVMDGGQIVEMGSHRELLLKDGLYARLTRKQADAMA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01262 155 Gene3D - 3 151 IPR027417 -
Pumo8g01262 155 Pfam ABC transporter 25 77 IPR003439 GO:0005524
Pumo8g01262 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 150 IPR027417 -
Pumo8g01262 155 ProSitePatterns ABC transporters family signature. 49 63 IPR017871 GO:0005524|GO:0016887
Pumo8g01262 155 PANTHER ABC TRANSPORTER B FAMILY 1 147 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01262 Pumo-Chr8 44459172 44460452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01262 3 153 Calmodulin-binding Proteins AT2G36910 49.677 5.90e-35 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01262 - - gmx:100775951 295.819