Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01241 ATGTCCATTGCATCGTTTTTTCTTATCTTCCTGTGTTATCATATGCTTCCTGCTCTTGCTGATCCAAGAGCCACAGAGGTAGCAGTGTTGTGCACCAACACAACAGCACCAATGCCTCAGCGACAAGCTTTCTTAACAAACTTCTACGATGCCTTGGAAGACTTAACCGCTTTGGTTACAAGTCAAAAGTATGCTCTTGTTGTTAAAGGGGCTACTCAAAATAATGCCACTGTCTATGCTTTTGGTGAGTGCATGAGAGATCTTACAAAACCAGATTGTGATGTGTGCTTTGCACAGTGCAAGACACGTGTCCTTAGGTGCTCTCCATTTCAGAGAGGCATTAAGGGTGGCATGGTTTTCTTTGATGGGTGCTATCTTAGGTATGATGGCTACAACTTCTTCAATGAGAGTCTTAGTCCTCAGGACGTGACTGTTTGTGGAACCGAAGATTTTATTGGGAATTGGAGTGTGTATAAGGCCAATACTGTGGAGTTGGTGAGAAATATGAGCATTGAAGCACCAAAGAATGAAGGGTTCTTTGTGGGGTATGTGAGTCGAATGAATGTGACTGTTTATGGGTTGGCTCAGTGCTGGAAGTTTGTGAATGGCAGTGCCTGTCAGAATTGTTTGGCTGAAGCTGTTACTAGGATTGATTCATGTGCTCCAAAAGCAGAAGGGAAGGCATTGAATGCAGGGTGTTACTTGAGGTATTCCACACACAATTTCTATAATAGTTCAAACAATAGTGCCCCTCAAGAAAATCAAGGAAATAAAAAACTTGCTATAATTGTGGTCGTGGCTGCATCATCTGCTTCTCTGGCTCTTCTGCTGGTTGTTGCAACTGTGATTTTCTTGGTGAGGACAAATTTACTGAAGTGGAGGAGAGAAAGAAGACAATTTGGTGCACTTTTGGACACGGTGAACAAGTCCAAACTAAATATGCCATATGAAATTCTTGAAAAAGCCACAGATTTCTTCAGTGATTCCAATAAGCTAGGAGAAGGGGGATCAGGGTCAGTTTATAAAGGAGCTCTGCCAGATGGAACTACTGTGGCTATAAAAAGGCTTAGCTTTAACACATCACAATGGGCAGATCATTTCTTCACTGAGGTCAATTTGATCAGTGGCATTCATCACAAAAACCTAGTGAAGCTTTTAGGGTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATTTGTGCCTAATCATAGCCTCTATGATCACCTATCTGGTAGAAAGAATTCTCAACAGTTGACATGGGAAGTCAGGCATAAAATCATATTGGGAACGGCAGAGGGCTTGGCCTATCTTCATGAGGAATCACAGAGAATCATTCATAGAGATATAAAATTAGGCAACATTCTCATTGATGATAACTTCACACCCAAGATTGCTGATTTTGGACTTGCTAGATTATTTCCAGAAGACAAGTCTCACCTTAGCACAGCCATTTGTGGCACACTGGGTTATATGGCTCCAGAATATATAGTGCTAGGGAAGTTAACTGAGAAAGCAGACGTCTACAGTTATGGGGTTCTAATTATGGAAATTATATCCGGCAAAAAGAGCAAATCCTTCGTTGAAAATTCATATTCCATCCTACACACGGTTTGGAGCCTTTATGGATCAAACAGGCTATGTGACATTGTTGATCCAATCCTAGAGGGAAATTATCCGGTGGAGGAAGCATGCAAACTCCTTAAGATAGGGTTGCTTTGTGCACAAGCATCAGCAGATCTTAGACCACCAATGTCAGTAGTTGTGAAAATGATTAACAACAATCATGAAATTACTCAGCCAACACAACCACCATTTCTTAGTTGTAGTAGTGCAGAATTCAGCAAATCTATTTCACAAGAGAGTTTTCAGCCTGGATCCTACACTCAGCCTTCAGAGGACAGCATGACCGAAAGTCTGATTCAACATAAATGGGTTACAATATAA 1950 0.4133 MSIASFFLIFLCYHMLPALADPRATEVAVLCTNTTAPMPQRQAFLTNFYDALEDLTALVTSQKYALVVKGATQNNATVYAFGECMRDLTKPDCDVCFAQCKTRVLRCSPFQRGIKGGMVFFDGCYLRYDGYNFFNESLSPQDVTVCGTEDFIGNWSVYKANTVELVRNMSIEAPKNEGFFVGYVSRMNVTVYGLAQCWKFVNGSACQNCLAEAVTRIDSCAPKAEGKALNAGCYLRYSTHNFYNSSNNSAPQENQGNKKLAIIVVVAASSASLALLLVVATVIFLVRTNLLKWRRERRQFGALLDTVNKSKLNMPYEILEKATDFFSDSNKLGEGGSGSVYKGALPDGTTVAIKRLSFNTSQWADHFFTEVNLISGIHHKNLVKLLGCSITGPESLLVYEFVPNHSLYDHLSGRKNSQQLTWEVRHKIILGTAEGLAYLHEESQRIIHRDIKLGNILIDDNFTPKIADFGLARLFPEDKSHLSTAICGTLGYMAPEYIVLGKLTEKADVYSYGVLIMEIISGKKSKSFVENSYSILHTVWSLYGSNRLCDIVDPILEGNYPVEEACKLLKIGLLCAQASADLRPPMSVVVKMINNNHEITQPTQPPFLSCSSAEFSKSISQESFQPGSYTQPSEDSMTESLIQHKWVTI 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01241 649 Gene3D Phosphorylase Kinase; domain 1 288 401 - -
Pumo8g01241 649 ProSiteProfiles Gnk2-homologous domain profile. 25 133 IPR002902 -
Pumo8g01241 649 CDD STKc_IRAK 332 595 - -
Pumo8g01241 649 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 79 627 - -
Pumo8g01241 649 Gene3D - 24 133 IPR038408 -
Pumo8g01241 649 Gene3D - 142 242 IPR038408 -
Pumo8g01241 649 FunFam Cysteine-rich receptor-like protein kinase 2 293 401 - -
Pumo8g01241 649 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Pumo8g01241 649 Pfam Salt stress response/antifungal 154 239 IPR002902 -
Pumo8g01241 649 Pfam Salt stress response/antifungal 31 129 IPR002902 -
Pumo8g01241 649 Gene3D Transferase(Phosphotransferase) domain 1 402 605 - -
Pumo8g01241 649 ProSiteProfiles Gnk2-homologous domain profile. 139 242 IPR002902 -
Pumo8g01241 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Pumo8g01241 649 SUPERFAMILY Protein kinase-like (PK-like) 312 623 IPR011009 -
Pumo8g01241 649 FunFam Cysteine-rich receptor-like protein kinase 3 142 242 - -
Pumo8g01241 649 FunFam Cysteine-rich receptor-like protein kinase 2 402 601 - -
Pumo8g01241 649 ProSiteProfiles Protein kinase domain profile. 326 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01241 649 Pfam Protein kinase domain 327 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01241 649 SMART serkin_6 326 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01241 Pumo-Chr8 44156425 44159987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01241 17 490 Receptor kinase-like Gene Family AT1G70530 58.403 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo8g01241 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01241 - - gmx:100802190 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01241 8 44156425 44159987 Pumo8g01241 8 44156425 44159987 ECH