Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01231 ATGCAGCGCAAGAAGAAGACCTACACCAAGCCCAAGAAGATCAAGCACAAGCACAAGAAGGTCAAGCTCGCCGTCCTCCAGTTCTACAAGGTCGACGATTCCGGCAAAGTCCAGAGGCTCCGCAAGGAGTGCCCCAACGCCGAGTGCGGCGCCGGAACTTTCATGGCCAACCACTTCGACCGCCACTACTGCGGCAAGTGCGGCCTCACCTATGTCTACCAGAAGGCCGGTGCTTAA 237 0.5781 MQRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGA 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01231 78 Pfam Ribosomal protein S27a 25 70 IPR002906 GO:0003735|GO:0005840|GO:0006412
Pumo8g01231 78 Gene3D - 2 77 IPR038582 -
Pumo8g01231 78 SUPERFAMILY Zn-binding ribosomal proteins 23 76 IPR011332 GO:0006412
Pumo8g01231 78 SMART Ribosomal_S27_2 25 70 IPR002906 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01231 23 78 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 89.286 1.17e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01231 K02977 - twl:119983611 138.272