Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01207 ATGGCTTCTTCAATGAGGATCTCAAGGCTGCTCTTTCGTTCTTCTCTTCCTGCTTCCACTACTCCTTTGTTTTCTAGAGGTGGAAGTGGTGCTCTTGGTGCAGGGCTCAGTAAATTCAGCACTGCTGCTGCCATTGAAGAACCAATCAAACCACCAGTTAAAGTAGAACACACCCAGCTCTTAATTGATGGAAAGTTCGTTGATGCTGCTACTGGCAAAACTTTTCCAACGTTGGACCCCAGGACAGGAGATGTGATTTCTCATGTTGCTGAGGGTGACCATGAAGATGTTGATCGAGCAGTTGCAGCTGCTCGCAAAGCCTTCGACCATGGACCTTGGCCAAAGATGACAGCCTATGAAAGACAAAGGATATTGCTGCGTGCTGCTGATCTGTTTGAAAAGCACAATGATGAGCTTGCTGCACTTGAGACTTGGGATAATGGGAAGCCATATGAACAATCTGCTCAAATCGAAATTCCAATGCTGGTTCGCCTATTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGGCCATATCATGTGCAAACATTGCATGAACCCATTGGTGTGGCCGGTCAAATCATTCCATGGAACTTCCCTCTTCTCATGTTTGCCTGGAAGGTTGGGCCAGCATTGGCCTGTGGTAACACCATTGTTCTCAAAACAGCTGAGCAGACTCCATTATCTGCTTTGTATGCATCAAAGTTGCTTCATGAGGCAGGACTTCCTCCTGGTGTTCTGAATGTAATATCTGGCTTTGGTCCAACTGCTGGTGCTGCCATTGCTACTCACATGGACATAGATAAGCTTGCTTTCACTGGTTCAACCGAAACTGGAAAAGTTGTCCTTGAATTGGCGGCTAGAAGTAATCTTAAACCTGTAACTTTGGAGCTTGGTGGGAAATCCCCTTTTATTGTATGTGAAGATGCTGATGTAGATGAGGCTGTTGAGCTAGCACACTTTGCATTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTAGAACATTTGTACACGAACGTGTGTACGATGAATTTATTGAGAAAGCAAAGGCACGTGCTGTGAAGCGTTCTGTTGGTGATCCATTCAAGGGTGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTCAGAAAATACTGAAGTATATTAGATCCGGTGTTGAAAGTGGAGCTACACTTGAAACTGGAGGAGATAGATTTGGCAACTCGGGCTTCTATATTCAGCCTACTGTCTTCTCAAATGTTAAGGATGACATGCTGATTGCAAAGGAAGAGATCTTTGGCCCAGTGCAATCCATACTAAAATTCAAGGACCTTGATGATGTGATTCAAAGAGCAAATAACACACACTATGGCCTTGCAGCAGGGGTCTTCACAAAGAACATTAACACAGCTAACACCTTGACTAGAGCATTGAGAGTTGGAACAGTGTGGGTGAATTGCTTTGATACATTTGATGCAGCAATCCCCTTTGGAGGGTATAAAATGAGTGGGCACGGAAGAGAAAAAGGAGAATACAGTCTCAAGAACTACTTGCAAGTGAAGGCTGTTGTTACATCCTTGAAGAACCCAGCTTGGCTTTGA 1617 0.444 MASSMRISRLLFRSSLPASTTPLFSRGGSGALGAGLSKFSTAAAIEEPIKPPVKVEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDHGPWPKMTAYERQRILLRAADLFEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIATHMDIDKLAFTGSTETGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKAKARAVKRSVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNSGFYIQPTVFSNVKDDMLIAKEEIFGPVQSILKFKDLDDVIQRANNTHYGLAAGVFTKNINTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGHGREKGEYSLKNYLQVKAVVTSLKNPAWL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01207 538 FunFam Aldehyde dehydrogenase, putative 500 526 - -
Pumo8g01207 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 526 IPR016162 GO:0016491
Pumo8g01207 538 Pfam Aldehyde dehydrogenase family 67 528 IPR015590 GO:0016491
Pumo8g01207 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Pumo8g01207 538 CDD ALDH_F2BC 55 530 - -
Pumo8g01207 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Pumo8g01207 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 45 528 - -
Pumo8g01207 538 SUPERFAMILY ALDH-like 54 532 IPR016161 GO:0016491
Pumo8g01207 538 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 62 323 - -
Pumo8g01207 538 FunFam Mitochondrial aldehyde dehydrogenase 2 310 499 - -
Pumo8g01207 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01207 Pumo-Chr8 43585511 43590096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01207 3 538 Aldehyde Dehydrogenase Gene Family AT3G48000 76.394 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01207 K00128 - gmx:100786773 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01207 8 43585511 43590096 Pumo8g01207 8 43585511 43590096 ECH