Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01197 ATGGTGGTGGCAGAGTTCCCTGGTGATGGTTTAAGAGGAATGAAGAACTTATTCTACCATGTTCTCACCGGTCGTTGGTTCATGCTATTTGCATCTTTGCTCATCATGGCTGCTGCTGGTGCAGCCTACATGTTTGGCATGTACTCTAACGAGGTCAAGACCTCTTTGGGCTATGATCAATCCACTCTCAACTTGCTCAGCTTCTTCAAGGATGTAGGTGCCACCGTTGGAATCATATCCGGGTTAGTGAACGAGATAACTCCACCCTGGGTGGTACTCTCAATTGGGACCATTATGAACTTCTTTGGCTACTTCATGATATGGCTTGCTGTCACAGGCCGCACTGCCAAACCCCAAGTTTGGCAAATGTGTCTCTTCATTTGCATTGGCTCAAATTCTCAAACCTTTGCCAACACTGGTGGTACAGTCACTTGTGTCAAGAACTTCCCGGTAAGCCGTGGCAATGTTTTAGGCCTACTCAAGGGTTATGTTGGTCTAAGTGGTGCCATCATTGCACAACTCTACCATGCCTTCTATGGTGATCACAACCCTCAGGCTCTTATCTTGCTCATTGCTTGGCTCCCTGCTGCTGTTTCCTTCCTTTTCCTTCCAACAATTCGGATATTGAAATCAAACACACTTCACCAACCCAATGAGAACAATGTTTTCTACAACCTCCTATATATTTCACTTGCCCTTGCTGGGTTTCTCATGGTTTTGATCATTATACAGAACAGGTTCAGTTTAACAAGGACCGAATACATACCCGGTGGCCTTGTGGTTTTCTTCTTTCTTCTTCTCCCACTTGTTGTGGTGTTTAGAGAGGAATTAAATTTAAACCAGTTAAAAGTAGTCACAGAAGTTCCTCCTCCAAATGTGGCATTACCACGGCAACAAGAAGCATCAGCTACGGAGAAAAGTTCTTGTTGTTTGGGGAACATACTCAAGCCCCCAAAGAGGGGAGAAGACTACACCATTTTGCAAGCATTGTTTAGTATTGACATGCTGATTCTGTTCATTGCAACAACATTTGGTGCTGGGGGAGCATTAACGGCCATAGACAATCTGGGACAGATTGGACGCTCATTGGGGTACCCAAGTAAAAGCATTACAACCTGTGTTTCCTTACTCAGCATATGGAACTACTTGGGACGGGTAACTGCAGGTTATGCCTCTGAAATCTTCTTGACCAAATACAAACTCCCTCGTCCCTGCATGCTCACTCTAGTTATGCTTCTCTCATGTGTTGGCTATGTTCTGATCGCCTTTGGCATCCCAAACTCTCTCTACTTCGCTTCCGTGATCATTGGTTTCTGTTTGGGAGCGCAATGGCCGCTAATGTTTGCAATCATTTCAGAAATATTCGGCCTTAAATACTACTCCACGTTGTACAACTTCGGAGCCGTGGCAAGCCCTGTTGGTTCCTACATTCTGAACGTGAGACTCACTGGTGCTTTGTACGACAAAGAGGGTCTGAAACAGTTGAAGGCCAGAGGACTCACGAGACAAGCAGGGAAGGACTTAACTTGCGTGGGAGTGCAATGCTATAGAATGGCTTTTGTCATAATCACGGCTGCAACGCTGTTTGGGTGTTTTGTTTCGTTCGTTTTGGTGCTGAGGACTAGAAAATTTTACAAAGGGGATATCTATGGAAAGTTCAGGGTGGAAGATGAAACAGAGAAAGAGATGGGGATCACCAAAAGTGGAAATAGTGTTGTGTTTGAAACACAAGGACACGCAAACTTGAGCAGCACCAGGGCTACTTCTGCTACCACAAGCGGCTCAGGGGAACAAGACAAAATCAATAGAAACTAG 1815 0.4523 MVVAEFPGDGLRGMKNLFYHVLTGRWFMLFASLLIMAAAGAAYMFGMYSNEVKTSLGYDQSTLNLLSFFKDVGATVGIISGLVNEITPPWVVLSIGTIMNFFGYFMIWLAVTGRTAKPQVWQMCLFICIGSNSQTFANTGGTVTCVKNFPVSRGNVLGLLKGYVGLSGAIIAQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRILKSNTLHQPNENNVFYNLLYISLALAGFLMVLIIIQNRFSLTRTEYIPGGLVVFFFLLLPLVVVFREELNLNQLKVVTEVPPPNVALPRQQEASATEKSSCCLGNILKPPKRGEDYTILQALFSIDMLILFIATTFGAGGALTAIDNLGQIGRSLGYPSKSITTCVSLLSIWNYLGRVTAGYASEIFLTKYKLPRPCMLTLVMLLSCVGYVLIAFGIPNSLYFASVIIGFCLGAQWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYILNVRLTGALYDKEGLKQLKARGLTRQAGKDLTCVGVQCYRMAFVIITAATLFGCFVSFVLVLRTRKFYKGDIYGKFRVEDETEKEMGITKSGNSVVFETQGHANLSSTRATSATTSGSGEQDKINRN 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01197 604 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 26 548 - -
Pumo8g01197 604 CDD MFS_Mch1p_like 24 531 - -
Pumo8g01197 604 SUPERFAMILY MFS general substrate transporter 25 546 IPR036259 -
Pumo8g01197 604 Pfam Nodulin-like 25 273 IPR010658 -
Pumo8g01197 604 MobiDBLite consensus disorder prediction 580 604 - -
Pumo8g01197 604 Gene3D MFS general substrate transporter like domains 327 545 IPR036259 -
Pumo8g01197 604 Pfam Major Facilitator Superfamily 339 541 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01197 Pumo-Chr8 43351926 43354223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01197 2 554 Nodulin-like Gene Family AT2G39210 62.632 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01197 - - gmx:100798313 892.108