Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01196 ATGGTGGGTGTAGGAGTAAGTGTATCAGCAGCAATGGTTGCAGCTCAGTTCTTGGAAGTGGGGTTGAACACTCTAATCAAAGCAGCAAACACCAATGGAATGAGTAATTTTGTTTTCATTGTGTACTCAAACCTCTTGGCTCTCTTCTTCCTTATACCCTCCACCTTCCTCTACCATAGGAAGAGAGCTCCTCCCCCAATCCAAAGCTCAATTCTCTGTAGGATGTTCCTTCTTAGCTGCATTAGTACTGCAGGGCAGACGTTGATGTACACTGGGATAGGATATAGCTCTCCCACACTATCCTCTGCTATGTTGGACCTTGTCCCTGCTTTTACCTTCATATTAGCCATTATTTCCAGGATGGAAAATCTGAATTTGAAACTGCATAGCTGCCAGGCAAAAATTATTGGCACAGTGATCTCGATTGCAGGGGCATTGATCGTCACTTTGTATAAAGGAATGGCATTGACTAGCGGTTCCTTGAGAAATATAGTATTGGGTGGAAGTGGAACTTTCCTCTCAGTGCAATCAGATTGGATAATTGGTGGTTTTCTTCTTGCAATTGGTAGCCTGTGCCTCTCAGTTTTGTTTATTGTTCAGACTTGGATTATGAAGGACTATCCTGAAGAATTAGTGGTAACAACCATTTGTTGCAGCCAGGTGGTAATCCTATCTGCCATAGTAGCTCTATTTGCAGAGGGAAACCCAAGAGCTTGGATACTCAAATCTGATAAAGAGTTGATAGCTGTATTCTATTCAGCAATATTTGTGGTATCAATGCGGAGTGTTGTATACACATGGGCATGTCGAGAGAAGGGACCAGTTTATGTAGCTATGTTTAGCCCTTTGGGAATGATCATTGCAATTGGCATGGGGATAGCATTTCTGGGAGAGAGTCTTTATCTAGGAAGTATGATTGGAGCTGCTACAATAGGTATTGGATTTTATGCTGTGATGTGGGCTCAGGCTCAAGAAGAAAATATGATAAATGAGAAGAATGAGAACCATGATTTTGTCACTTCTTCTTCAGCTCCTCTGTTGTCTACCTAA 1050 0.421 MVGVGVSVSAAMVAAQFLEVGLNTLIKAANTNGMSNFVFIVYSNLLALFFLIPSTFLYHRKRAPPPIQSSILCRMFLLSCISTAGQTLMYTGIGYSSPTLSSAMLDLVPAFTFILAIISRMENLNLKLHSCQAKIIGTVISIAGALIVTLYKGMALTSGSLRNIVLGGSGTFLSVQSDWIIGGFLLAIGSLCLSVLFIVQTWIMKDYPEELVVTTICCSQVVILSAIVALFAEGNPRAWILKSDKELIAVFYSAIFVVSMRSVVYTWACREKGPVYVAMFSPLGMIIAIGMGIAFLGESLYLGSMIGAATIGIGFYAVMWAQAQEENMINEKNENHDFVTSSSAPLLST 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01196 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 323 - -
Pumo8g01196 349 PANTHER WAT1-RELATED PROTEIN 10 331 IPR030184 GO:0016020|GO:0022857
Pumo8g01196 349 Pfam EamA-like transporter family 20 149 IPR000620 GO:0016020
Pumo8g01196 349 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Pumo8g01196 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01196 Pumo-Chr8 43296219 43350673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01196 11 349 Nodulin-like Gene Family AT3G28050 44.000 6.01e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01196 - - gmx:100793168 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01196 8 43296219 43350673 Pumo8g01196 8 43296219 43350673 ECH