Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01194 ATGCAGGGCACAGAGGTAACCTTAGTGATGGTTGTGGCACAAGTCCTGAGTGTGGGTTTGAACACTCTGATCAAAGCAGCAATGTCTAAAGGGATGAGCAATTTTGTTTTTGTTGCCTACTCAAACCTTCTCGGATTCTGTTTTCTGCTTCTAGCAACCACAATTCGTCACAGAAACAGAGCTCCCGCACCGATCAATAATTCCATACTCTTCAGAATTTTTGTTCTTGGCTTGCTCAGCGTTTCCATACAGACGCTTATTTATACTGGACTTGGGTATAGCTCTCCCACTCTGTCCTCAACCATGGAGGATCTTATTCCAGCTTATACTTTCATAATTGCCATTATTTTCAGGATGGAAAAGCTAGATCTAAAACTACGAAGTTGCCAAGCAAAATCTATTGGGACTGCTGTCTCAATCCTAGGGGCATTAATTGTGACTTTATACAAGGGGTTGCCGATGACAAGTGATGTGACACTAAACAATATATTTCTCTCATCTCAACAATCAGAATGGCTACTAGGAGGATTTCTTCTTGCAGTTGGTAGCTTTGGTGGTTCAGTCTCACTTGTTATCCAGTCTTTTCTCTACATTATGCAGACTTGGACTATTAAAGACTACCCTGAGGAGCTAATGCTAATAACCATTGGTAGCAGTTTCTCTGTTATCCTATCTTTCATAGTAGCGTTCATTGCAGAGGAAAATCCTAAGGCATGGATACTGAAACTTGATATGGAGTTAGTGTGCATATTCTATTCAGCAGTTGTGGTGATGTCTACACGAAATGTGGTGTATGCATGGGCATGTCGAAAGAAAGGGCCTGTATATGTTGCTATGTTTAGTCCTTTAGGAATTGTCATTGCACTTGCCATGGGGATTGTATTTTTGGGAGACGCTCTATATCTTGGAAGTATGATAGGAGCTGCTATAATAGCTATTGGATTTTATGCTGTAATATGGGGTCAAGCTCAAGAGGAAAAGTTGACTTGCGAAAAATATGAAACCTATAGCATTATCTCATCGTCTTCATCTGAAGTCCCTCCATTGTTGAACAAAAGCAAAGACACAAGTTCTTTTGTATGA 1083 0.4044 MQGTEVTLVMVVAQVLSVGLNTLIKAAMSKGMSNFVFVAYSNLLGFCFLLLATTIRHRNRAPAPINNSILFRIFVLGLLSVSIQTLIYTGLGYSSPTLSSTMEDLIPAYTFIIAIIFRMEKLDLKLRSCQAKSIGTAVSILGALIVTLYKGLPMTSDVTLNNIFLSSQQSEWLLGGFLLAVGSFGGSVSLVIQSFLYIMQTWTIKDYPEELMLITIGSSFSVILSFIVAFIAEENPKAWILKLDMELVCIFYSAVVVMSTRNVVYAWACRKKGPVYVAMFSPLGIVIALAMGIVFLGDALYLGSMIGAAIIAIGFYAVIWGQAQEEKLTCEKYETYSIISSSSSEVPPLLNKSKDTSSFV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01194 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 323 - -
Pumo8g01194 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
Pumo8g01194 360 PANTHER WAT1-RELATED PROTEIN 7 334 IPR030184 GO:0016020|GO:0022857
Pumo8g01194 360 Pfam EamA-like transporter family 9 147 IPR000620 GO:0016020
Pumo8g01194 360 Pfam EamA-like transporter family 189 319 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01194 Pumo-Chr8 43247767 43251744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01194 10 350 Nodulin-like Gene Family AT5G40240 40.401 6.69e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01194 - - gmx:100792641 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01194 8 43247767 43251744 Pumo8g01194 8 43247767 43251744 ECH