Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01192 ATGGACTGTGAACCTTTTATTATGTGCTTCAAGGATGGAAAAGTTAGATCTAAAACTACGAAGCTACCAGGCAAAATCCATTGGAACTGTGATCTCAATTGTAGGAGCATTAACTGTGACCTTATACAAGGGGTTGCCTATGACAAGTGGTGTGGTGTCAAACGATGTGATTCTCTCATCACAACAATCAAATTGGATATTAGGAGGCTTTCTTCTTGCAATCGGTTGCTTTTGTGGTTCAGTCTCGCTTGTTATCCAGAGGAAGATCCTAAGGCATGGCTACTTAAACCTAATATGGAGTTGGTGTGCATATTCTATTCAGCAATTTTTGTGATGTCTACACGAAGTGTGGTGTATGCATGGGCATGTCGAAAGAAAGGGCCTGTATATGTTGCTATGTTCAGTCCTTTAGAAATTGTCATTGCACTTGCCATGGGAGTTGTATTTTTGGGAGATGCTCTATATCTTGGAAGTATGATAGGAGCTGCTATAATAGCAATTGGGTTTTATGCTGTAATATGGGGTCAGGCTCAAGAGGAAAAACTTGTATATGAAAATTATGAAATCAATACCATTATTTCATCGTCTTCTTCTGAAGCCACTTTGTTACTAAACCAAAGCAAGGGCAAAAGTTCTTTTGTATGA 645 0.3891 MDCEPFIMCFKDGKVRSKTTKLPGKIHWNCDLNCRSINCDLIQGVAYDKWCGVKRCDSLITTIKLDIRRLSSCNRLLLWFSLACYPEEDPKAWLLKPNMELVCIFYSAIFVMSTRSVVYAWACRKKGPVYVAMFSPLEIVIALAMGVVFLGDALYLGSMIGAAIIAIGFYAVIWGQAQEEKLVYENYEINTIISSSSSEATLLLNQSKGKSSFV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01192 214 SUPERFAMILY Multidrug resistance efflux transporter EmrE 97 177 - -
Pumo8g01192 214 PANTHER WAT1-RELATED PROTEIN 83 188 IPR030184 GO:0016020|GO:0022857
Pumo8g01192 214 Pfam EamA-like transporter family 90 173 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01192 Pumo-Chr8 43222890 43226727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01192 85 182 Nodulin-like Gene Family AT5G40230 52.041 2.99e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01192 - - gmx:100305655 204.142