Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01190 ATGGTGAGATTGGAGAATGGTAGGGGCAAATTACTACCATTTCTGGGGATGTCGGTGGCTATGCTAACTCAAAGTGGAAGCATGGTGGTAATCAAATTTGCCATGACTGATGGGATGAACAAGTATGTCATGGTTGTGTATTCAATGGCACTCTCCAGCTCCATATTTCTCCCCTTTTTCTTGTTTCTACACAGCAGGTCAGAGCGTCCTCCTCTTACATTCTCTGCACTTCGCAGCTTCTTTTTGCTTGCTCTGTTTGGGAGTTCAGCACAGATAATGGCTTATGTTGGCATAGAACTCAGCTCACCCACACTTGCATCAGCAATACTTAACCTCATTCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAGAAATACATTGGAGATATTTTAGCAGCCAAGCTAAAGTCTTGGGAACGATAGTATCCATTGGTGGAGCATTTGTGGTGATACTGTACAAGGGTCCACCTATCTTTAGGACGCATTCGTCATACACTTCAATCAAACGTCAATTTTCGGCACAAACACAACCAAACTGGATCTTGGGAGGAATATTCTGCGTTGCCGATTCTTTCCTTACTTCCATGTGGTACATATATCAGGCTTCGGTGGCAAAGAAATACCCTGCTGTAACAGTGACAGTGTTCTTCCAATTCTTATTTTCAACCATTCAGTGTGGAGTATTTGCCTTAATTGCAGTTAGAGATCCAACGGAATGGGAGCTAAAGTTCGATAAGGGGTTGAGTGTCATTTTATATCAGGCAATAGTTGCAACAATGTTACGTTACACCCTATGCACATGGTGCGTCCATAGAGCAGGACCTCTGTTTTGTGCTATGTTCAAGCCTATGGGAATCATCTTCACCGTCTTCATGAGTGCAATCTTTCTCGGGGATAATTTCGGCCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGGTAGGATTTTACGCTGTACTGTGGGGGAAATCCAGAGAGGAGAACAAGATTGAGAAAGGGGTTGAGAACTTGGAGTCATCGTGCCATAATGCTCCTTTATTACAAAATAGGTCGTAA 1065 0.43 MVRLENGRGKLLPFLGMSVAMLTQSGSMVVIKFAMTDGMNKYVMVVYSMALSSSIFLPFFLFLHSRSERPPLTFSALRSFFLLALFGSSAQIMAYVGIELSSPTLASAILNLIPAFTFILALIFRMEEIHWRYFSSQAKVLGTIVSIGGAFVVILYKGPPIFRTHSSYTSIKRQFSAQTQPNWILGGIFCVADSFLTSMWYIYQASVAKKYPAVTVTVFFQFLFSTIQCGVFALIAVRDPTEWELKFDKGLSVILYQAIVATMLRYTLCTWCVHRAGPLFCAMFKPMGIIFTVFMSAIFLGDNFGLGSLIGAVIIVVGFYAVLWGKSREENKIEKGVENLESSCHNAPLLQNRS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01190 354 Pfam EamA-like transporter family 186 323 IPR000620 GO:0016020
Pumo8g01190 354 Pfam EamA-like transporter family 16 154 IPR000620 GO:0016020
Pumo8g01190 354 PANTHER WAT1-RELATED PROTEIN 13 334 IPR030184 GO:0016020|GO:0022857
Pumo8g01190 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 157 - -
Pumo8g01190 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01190 Pumo-Chr8 43198281 43202490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01190 10 352 Nodulin-like Gene Family AT3G28050 39.888 2.32e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01190 - - gmx:100816715 584.334