Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01167 ATGGGACTTGTAAAGGGAAAGTGGAAGCAAAACATGATTTTCAAGGCGTGGGAGCGTTGCCGATTATTTTCAAAGCCACACTTGAAATTAAAAGCAACTCTGTCAGAGACTGATGATGATGAGGAGAAGGGTCATCAAATAGCACCTCATGGTTGTTTTTCAGTGCATGTTGGACCAGAGAGACAAAGGTTCGTTGTGAAGACCAAGTACGTTAACCACCCACTCTTTCAGATGCTGCTAGAAGAGGCAGAACAGGAATATGGGTTCGAGAGTGATGGCCCCATTTGGCTTCCTTGCAACGTCGATTTGTTCTACGAAGTGTTGGCTGAGATGGATGGCGAAGAGAATAATAATAACAACATCATTTTCCACGGTTCTCGAAGATGCTTCATTACCATGGCTAAGGTTTTTTCCCTTCTTCGTTCTTCGCAGCCCGGCACGTCTTCTTTGTCACATGAACAAGGGTCATAG 471 0.4459 MGLVKGKWKQNMIFKAWERCRLFSKPHLKLKATLSETDDDEEKGHQIAPHGCFSVHVGPERQRFVVKTKYVNHPLFQMLLEEAEQEYGFESDGPIWLPCNVDLFYEVLAEMDGEENNNNNIIFHGSRRCFITMAKVFSLLRSSQPGTSSLSHEQGS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01167 156 Pfam Auxin responsive protein 32 109 IPR003676 GO:0009733
Pumo8g01167 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01167 Pumo-Chr8 42363319 42363861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01167 31 109 Calmodulin-binding Proteins AT4G34750 41.772 6.38e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01167 K14488 - gmx:100793967 244.973