Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01150 ATGTCTTTGAACATGATGCTTCTTCCTCTTCTGAGCCTTGTTGTTTTACAAAGTTTTGTAATACCAATCTGCTATAGCCAGACCAATAATCCTCAGAATATTGAAACATTTTATCCAATCCAAAATCTAGAACCACCCCTCCCAATCCAACCTCCTGAGCCACCACCAAGGCCACTAGCATCACTACCATCACCAGGACCAGTGGCTGCATCAAAAACCTCTTCATCAAGCAGTAAGATAGGAACAGCAGTGGCTGCAACTGCAGCAAGTACTCTAGTTGTTTCTGGTCTGATTTTCTTCTTGGTTCAAAGGTGCTTCAGAGCAAGGAAGAGAAGGGAGATAACAAACAACACTGCTTCTGCTGTAGATAGGCGCGTGGCGCGTCAGGTAGACGTGTTTGAGAGAGTGGAAGGAAATGTCAAGGGACTGATTGTTGATGAGGAAGGTTTGGATGTGGTTTACTGGAGAAAACTCGAAGGTAAAAAATTACCAGACAAGGATTTCCAAAGGGAGGTCTTGGATAGCCCCAAAGACAAAGAAGAAGATGATCATGAGGGGAACGAAGGGAAAAGATCTGAGTCCATTCAAGAAATTCCTCTGCTTAGAGACAAATCTTCAACTTCTCACATGAATATATTTCTTCCAGAAGAATCATATACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCCAGTGTTCCTTCATCAATTGGAGCCTCTCCTACTACTCCTTCATCACCAAAACCACTCAACACTTTTTTCTCATCAATTCCAAACATGACAAATCCTTCACCAACAATACCTGATAGAAATAATCAAGCACCAGCACTACCTCCTCCACCACCAATCCCCTTTAGAGAGACCCCAACACCACCACCTCCTCCACCACCAATCCCAGGTAGAAAGAGCTCAACGCCACCACCGCCACCACCACCAATCCCAAGTAAAAAGAACTCAGCAGCAGCACCACCTCCTCCACCAATTCCTCCTAGAAAGAGTCCAGCACCACCTCCTCCTCCACCAAAGGCAAGTGGTTTGAAGTCATCATCAAAACCACCACCTACCCCTATTGAAAGAACACCAAGTACCACAAGTAGGCAAGGCAACACTTCACCTGAGGTAAAACTGAAGCCATTACATTGGGATAAGGTGACTACCAACCTTGATCACTCTATGGTATGGGACAAAATGGACCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTCTTCGGGTTAGTCGCCACCAACCGAAATGATAATACCCCAAAAGTAAATAACTCAATGAGTCCTAGCAGGGATGCTTTGGCTCCATCAGCGAATACCTTCATTCTTGACCCCAGAAAATCACAAAACATTGCTATTGTTTTGAAGTCTCTGGCAGTCTCACGTAAAGAAATTATTGAAGCACTCATTGATGGTCAAGGCCTTAACACAGACACCATTGAAAAGCTTGGTAGAGTAGCCCCAACAGAAGAAGAGCAATCACTTATACTTGCATATGAAGGAGACCCTTCAAAACTTGCTGTAGCTGAATCTTTCCTACATCACATCCTCAAAGCTGTTCCTTCAGCATTTAAGCGCTTGAATGCTTTGCTGTTCAGGTTGAATTATGACTCCGAGATTGTAGAAATCAAGGAGTTTCTGCAGACCCTTGAGCTGGGGTGCAAGGAGCTTCGTAACCAAGGAATGTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCTGGAAATCGCATGAATGCAGGCACTCACAGGGGTAATGCTCAAGCTTTCAACTTGGTTTCTCTCAGAAAGCTCTCTGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCGCTTTGTGGTTGAAGAAGTTGTTCGTTCTGAAGGAAAACGTGCTATTCTGAACCGCAATCACAGTTTGAGTCGTAGTAGCAGTAGGAACAGCAACAACAGTGTAGATTCTCAAAACTCTGCTGCTTCAAATGAACAAAGACAAAGGGAATATATAACACTAGGATTGCCAGTTGTAGGAGGGATCAGTTCTGAGTTTTCCAACTTAAAGAAAGCTGCGGTTACAGATTACAACAGTTTTGTTGGTTCAATCACATCACTCTCAGCCAGGATTGTTGAGATTAGAGAACTTGTTTCCCAGTGTGGAAATGACAAGGGAGGAAACTTTGTGAAAGAAATGAACCATTTTCTTGAAAATGCTGAGGAGGAACTTAGATTAGTGAGAGAGGAGCAAACAAGGGTTATGCAGCTTGTGAGAAGAACAACAGATTATTATCAAGGAGGAGCTTCAAAAGAGAGTGCAGAAAACCCTCTTTATCTATTTGTCATAGTTAAAGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGACACCTAAGGTAAATTAA 2418 0.433 MSLNMMLLPLLSLVVLQSFVIPICYSQTNNPQNIETFYPIQNLEPPLPIQPPEPPPRPLASLPSPGPVAASKTSSSSSKIGTAVAATAASTLVVSGLIFFLVQRCFRARKRREITNNTASAVDRRVARQVDVFERVEGNVKGLIVDEEGLDVVYWRKLEGKKLPDKDFQREVLDSPKDKEEDDHEGNEGKRSESIQEIPLLRDKSSTSHMNIFLPEESYTIMRIPPPAPPPSVPSSIGASPTTPSSPKPLNTFFSSIPNMTNPSPTIPDRNNQAPALPPPPPIPFRETPTPPPPPPPIPGRKSSTPPPPPPPIPSKKNSAAAPPPPPIPPRKSPAPPPPPPKASGLKSSSKPPPTPIERTPSTTSRQGNTSPEVKLKPLHWDKVTTNLDHSMVWDKMDRGSFRVDDDLMEALFGLVATNRNDNTPKVNNSMSPSRDALAPSANTFILDPRKSQNIAIVLKSLAVSRKEIIEALIDGQGLNTDTIEKLGRVAPTEEEQSLILAYEGDPSKLAVAESFLHHILKAVPSAFKRLNALLFRLNYDSEIVEIKEFLQTLELGCKELRNQGMFVKLLEAVLKAGNRMNAGTHRGNAQAFNLVSLRKLSDVKSTDGKTTLLRFVVEEVVRSEGKRAILNRNHSLSRSSSRNSNNSVDSQNSAASNEQRQREYITLGLPVVGGISSEFSNLKKAAVTDYNSFVGSITSLSARIVEIRELVSQCGNDKGGNFVKEMNHFLENAEEELRLVREEQTRVMQLVRRTTDYYQGGASKESAENPLYLFVIVKDFLGMVDQACIEIARNMQKRKTPKVN 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01150 805 Coils Coil 724 751 - -
Pumo8g01150 805 PANTHER FORMIN-RELATED 304 796 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pumo8g01150 805 MobiDBLite consensus disorder prediction 169 209 - -
Pumo8g01150 805 MobiDBLite consensus disorder prediction 633 660 - -
Pumo8g01150 805 Gene3D Formin, FH2 domain 388 804 IPR042201 -
Pumo8g01150 805 MobiDBLite consensus disorder prediction 45 63 - -
Pumo8g01150 805 SUPERFAMILY Formin homology 2 domain (FH2 domain) 444 800 - -
Pumo8g01150 805 MobiDBLite consensus disorder prediction 272 347 - -
Pumo8g01150 805 ProSiteProfiles Formin homology-2 (FH2) domain profile. 366 805 IPR015425 -
Pumo8g01150 805 MobiDBLite consensus disorder prediction 222 237 - -
Pumo8g01150 805 Pfam Formin Homology 2 Domain 370 785 IPR015425 -
Pumo8g01150 805 MobiDBLite consensus disorder prediction 169 198 - -
Pumo8g01150 805 MobiDBLite consensus disorder prediction 45 75 - -
Pumo8g01150 805 SMART it6_source 366 800 IPR015425 -
Pumo8g01150 805 MobiDBLite consensus disorder prediction 238 271 - -
Pumo8g01150 805 MobiDBLite consensus disorder prediction 222 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01150 Pumo-Chr8 41689856 41692603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01150 4 801 FH2 protein (formin) Gene Family AT1G70140 45.043 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01150 - - gmx:100780368 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01150 8 41689856 41692603 Pumo8g01150 8 41689856 41692603 ECH