Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01130 ATGAAACAGATTCGTGCTCCATCTCTTCAGGAAGTGCTGAAAATAAGTTTTGATGCTTTGGATGAACAAGAGCAGTGTGTATTCCTTGACATTGCTTGTTTGTTTGTGCAAATGGAAATGAAGAGGGATGATGTGGTTGATATTTTGAATGGGTGTAATTTTAGAGGAGATATAGCACTGACTGTGCTCACTGCAAGATGTCTGATTAAAATCACTGGTGATGGTAACCTGTGGATGCATGATCAAGTTAGGGACATGGGAAGGCAAATTGTGCATAGTGAAAGCCTTACAGATCCTGGTCAACGTAGCAGGCTTTGGGAGCGTGATGAAATCTTGACTGTCTTGAAGAATATGACGGGAACAAGGAATGTTCAAGGAATTGTCCTTGATTGTGTCAAGAGAAGAATGTCCACTCCTAGAGATCGCTCTGCTGATGAAATTACTTGGGAAAATTTTCGACGTAAGCCCAGCTGGAAATCTGCTTTAGAATATATTAAAGAAAAGTATAAAAAGTATGTGCTGGATAGAGAAGAGAGAGCAAAAGAGGTTATACTTCAGCCCAAGCACTTTCAACCAATGGTTTCCTTAAGACTGCTTCAAATTAATTATTCGAGATTGGAAGGACAATTCAGATGCCTTCCCCCAGGGCTGAAGTGGTTGCAATGGAAACAATGTCCATTAAGGTATATGCCTTCTAGCTATAATCCTTTGGAACTTGCTGTGATGGATCTCTCGGAAAGTAAGATTGAAACTGTGTGGGGTGGACGCAGTAACAAGGTGGCTAAGCACTTGATGGTTTTAAACCTCTCCAATTGCCACCGTTTGACAGCAACTCCTGATTTAACTGGGTATCTATCTCTTCAAAAGATTATTTTGGAAGAATGCTTCTCATTTAACTAG 900 0.4044 MKQIRAPSLQEVLKISFDALDEQEQCVFLDIACLFVQMEMKRDDVVDILNGCNFRGDIALTVLTARCLIKITGDGNLWMHDQVRDMGRQIVHSESLTDPGQRSRLWERDEILTVLKNMTGTRNVQGIVLDCVKRRMSTPRDRSADEITWENFRRKPSWKSALEYIKEKYKKYVLDREERAKEVILQPKHFQPMVSLRLLQINYSRLEGQFRCLPPGLKWLQWKQCPLRYMPSSYNPLELAVMDLSESKIETVWGGRSNKVAKHLMVLNLSNCHRLTATPDLTGYLSLQKIILEECFSFN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01130 299 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 297 IPR044974 GO:0006952
Pumo8g01130 299 SUPERFAMILY "Winged helix" DNA-binding domain 9 116 IPR036390 -
Pumo8g01130 299 Gene3D Ribonuclease Inhibitor 182 299 IPR032675 -
Pumo8g01130 299 SUPERFAMILY L domain-like 184 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01130 Pumo-Chr8 41461310 41464109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01130 19 295 WRKY Transcription Factor Family AT4G12020 28.179 8.91e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01130 - - gmx:100784137 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01130 8 41461310 41464109 Pumo8g01130 8 41461310 41464109 ECH
Pumo8g01130 8 41461310 41464109 Pumo8g01130 8 41461310 41464109 PCT