Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01117 ATGGCAAAAAAGGACTTGAGGCTTTTGGGGCTTTTGGGTGATTATGAGATTGTTGAAGAGACCTTGAATCCCAAAAGCGACCTGCTTCTTAAGTCCAACCCTGTGCACAAGAAAATCCCAGTTTTGTTCCATGGAGATAAAACCATACGTGAATCTGCAATCATAGTTGAGTACATTGATGAGGTTTGGACCAATGCTCCCTCCATCCTTCCACAAAATGCTTATGACCGAGCCAATGCCCGATTTTGGGTTGCTTACATTGATGACAAGTGGTTTAAGTCCATATTTAATATTCTACTGGCTGAAGATGACGAGGCAAAGAAGCCACACTTTGTGGAAATGGAAGGAGTACTTGAGAGGATGGAAGAAGTGTTGAACAAGTGCAGTGAAGGAAAGGCCTATTTTGGAGGGGATACAATTGGAATTATTGACATTGTTTTTGGGAGCTTTTTGAGTTGGATGAGCATCACAGAGGAGATGAATGGATGA 489 0.4213 MAKKDLRLLGLLGDYEIVEETLNPKSDLLLKSNPVHKKIPVLFHGDKTIRESAIIVEYIDEVWTNAPSILPQNAYDRANARFWVAYIDDKWFKSIFNILLAEDDEAKKPHFVEMEGVLERMEEVLNKCSEGKAYFGGDTIGIIDIVFGSFLSWMSITEEMNG 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01117 162 SFLD Main.3: Omega- and Tau-like 14 161 IPR045073 -
Pumo8g01117 162 SUPERFAMILY GST C-terminal domain-like 69 160 IPR036282 -
Pumo8g01117 162 Pfam Glutathione S-transferase, N-terminal domain 14 61 IPR004045 -
Pumo8g01117 162 Gene3D - 70 162 - -
Pumo8g01117 162 SFLD Main (cytGST) 14 161 - -
Pumo8g01117 162 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 14 161 IPR045073 -
Pumo8g01117 162 Gene3D Glutaredoxin 5 69 - -
Pumo8g01117 162 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 67 IPR004045 -
Pumo8g01117 162 SUPERFAMILY Thioredoxin-like 2 92 IPR036249 -
Pumo8g01117 162 CDD GST_C_Tau 74 162 IPR045074 GO:0004364|GO:0006749
Pumo8g01117 162 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 73 162 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01117 Pumo-Chr8 41266254 41267366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01117 1 158 Glutathione S-transferase Gene Family AT1G10360 49.143 9.19e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01117 K00799 - gmx:547576 252.292