Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01116 ATGGCTAAAAACGACTTAAAGCTTTTGGGTGGCTGGTTCAGTCCATTTGCACTGAGGGTGCAAATTGCCCTTAACCTCAAGGGTAGAGATTATGAGGTTGTTGAAGAGACCTTGAATCCCAAAAGTGACCTGCTTCTTAAGTCCAACCCTGTGCACAAGAAAATCCCAGTTTTCTTCCATGGAGATAAAGTCATATGTGAATCTGCAATCATAGTTGAGTACATTGATGAGGTTTGGACCAATGCTCCCTCCATCCTTCCATCAAATGCTTATGATCGAGCTAATGCCCGATTTTGGTTTGCTTACACTGATGACAAGTGGTTTACGTCCTTGAAAAGTGTTCTAGTGGCTGAAGATGATGAGGCAAAGAAGCCACACATTGAGCAAGCGGAAGAAGTACTTGAGAGGTTGGAAGAAGTGTTCAACAAGTACAGTGAAGGAAAGGCCTATTTCGGAGGAGATACGATTGGATTCATTGACATTGGTTTTGGGAGCTTCTTGAGTTGGATGAGAGTCATAGAGGAGATGAGTGGAAGAAAATTGCTTGATGAAACGAAGCACCCTGGTTTGGCCCAATGGGCTGAAACGTTTGCTGCTGATCCTGCTGTGAAGGGCCTTCTGCCAGAGACTGATAAGCTTGTTGAGTTTGCCAAGATTCTTAAGCTAAAATGGGCTGCTGCAGCTGCAGCTGCAAAGTAA 699 0.4435 MAKNDLKLLGGWFSPFALRVQIALNLKGRDYEVVEETLNPKSDLLLKSNPVHKKIPVFFHGDKVICESAIIVEYIDEVWTNAPSILPSNAYDRANARFWFAYTDDKWFTSLKSVLVAEDDEAKKPHIEQAEEVLERLEEVFNKYSEGKAYFGGDTIGFIDIGFGSFLSWMRVIEEMSGRKLLDETKHPGLAQWAETFAADPAVKGLLPETDKLVEFAKILKLKWAAAAAAAK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01116 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Pumo8g01116 232 FunFam Glutathione S-transferase U9 86 227 - -
Pumo8g01116 232 Gene3D - 86 229 - -
Pumo8g01116 232 SFLD Main.3: Omega- and Tau-like 2 228 IPR045073 -
Pumo8g01116 232 FunFam Glutathione S-transferase GSTU6 1 86 - -
Pumo8g01116 232 SFLD Glutathione Transferase (cytosolic) 2 228 IPR040079 -
Pumo8g01116 232 CDD GST_C_Tau 90 220 IPR045074 GO:0004364|GO:0006749
Pumo8g01116 232 SUPERFAMILY GST C-terminal domain-like 77 220 IPR036282 -
Pumo8g01116 232 Coils Coil 127 147 - -
Pumo8g01116 232 Pfam Glutathione S-transferase, C-terminal domain 126 195 - -
Pumo8g01116 232 CDD GST_N_Tau 6 79 - -
Pumo8g01116 232 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Pumo8g01116 232 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Pumo8g01116 232 Gene3D Glutaredoxin 1 85 - -
Pumo8g01116 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 220 IPR010987 -
Pumo8g01116 232 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 215 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01116 Pumo-Chr8 41262957 41264556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01116 1 220 Glutathione S-transferase Gene Family AT1G10360 57.014 7.68e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01116 K00799 - gmx:547576 388.267