Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01085 ATGGGGTTGGGTGCTGAGAATGGTAAGGTGGTGGAGTCTTGGGATGTGTGTAAATCAAAGGGGAGGAAGAAGAAGAAGAAGGGGGATGAGGAAGTGGAAGGGGCTCAGGCTGGGTGTTGGGTCAGGCTGAGGTTTATTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGATACCTCAGTCAGTGGCAGTGGTACCAGTACTCATTATGCTGAAAGTAAATCAACTAATGATACTAGTAGAGACCAACCAACTGCTCCAGCAGTCTCTTCTACAACCACTAGCAATACAGAAAGCAATTCATCCACATCCAAACTTGAAGAAGAGCTTAAAATTGCTTCCAGGCTGCTTAAGTTCTCTTTCAATGATCTTAAGTTAGCAACAAGAAATTTTCGGCCCGAGAGTTTTCTTGGTGAAGGTGGGTTTGGTTGTGTTTTCAAGGGGTGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACGGTTGCTGTAAAAACCCTAAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGTGACCTAGTTCATCCGAACCTTGTTAAACTTGTAGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGGGGTAGCCTGGAAAATCACTTATTTAGGAGATCCATGCCTCTTCCATGGTCCATTAGAATGAAAATTGCACTAGGAGCTGCTAAGGGTCTTGCTTTTCTTCATGAAGAAGCTGAACGACCGGTTATATATAGGGATTTTAAAACTTCGAATATACTATTAGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGTCTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGTTATGCAGCACCGGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTCGGAGTGGTACTACTTGAGATGTTGTCCGGCAGAAGATCCATGGACAAACACCGACCCAACGGTGAGCATAACCTTGTGGAATGGGCTCGACCACATCTAGGAGAGAGGAGAAGGTTCTACAGGTTGATAGACCCTCGCTTGGAAGGCCATTTTTCGATAAAAGGAGCTCAGAAAGCTGCCCAACTGGCTGCTCACTGCCTTAGTAGAGATCCAAAAGCCAGACCCCTAATGAGTGAAGTTGTGGAAGCTTTAAAGCCTTTGCCAAACCTTAAGGACATGGCAAGCTCTTCATATTATTTCCAGGCAATGCAAGCTGACCGCTTTGGAGCGAGCCCAAACACAAGAAATGGGCGAACTGCAAGGAGCGTTGCTCACCCGCAATGGACAGCAGCAAAGGAGCCTTTCAATACCAAATGGTACTTATGCATCTCCATATCACCATCAGTTTCCCCAACCATCACCAAAACCCAATGGCAAAGCATAGAGCTGGTGAAAATTTTCTTTTTCTCTTTCACCCTTTACACCATTTCTTAG 1512 0.4497 MGLGAENGKVVESWDVCKSKGRKKKKKGDEEVEGAQAGCWVRLRFIGSCISSRSKVDTSVSGSGTSTHYAESKSTNDTSRDQPTAPAVSSTTTSNTESNSSTSKLEEELKIASRLLKFSFNDLKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSMPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLSGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQAMQADRFGASPNTRNGRTARSVAHPQWTAAKEPFNTKWYLCISISPSVSPTITKTQWQSIELVKIFFFSFTLYTIS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01085 503 MobiDBLite consensus disorder prediction 55 102 - -
Pumo8g01085 503 ProSiteProfiles Protein kinase domain profile. 130 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01085 503 PANTHER OS01G0588500 PROTEIN-RELATED 94 413 - -
Pumo8g01085 503 Gene3D Transferase(Phosphotransferase) domain 1 216 431 - -
Pumo8g01085 503 SUPERFAMILY Protein kinase-like (PK-like) 108 410 IPR011009 -
Pumo8g01085 503 Gene3D Phosphorylase Kinase; domain 1 89 215 - -
Pumo8g01085 503 ProSitePatterns Protein kinases ATP-binding region signature. 136 168 IPR017441 GO:0005524
Pumo8g01085 503 FunFam Probable serine/threonine-protein kinase PBL8 216 431 - -
Pumo8g01085 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Pumo8g01085 503 Pfam Protein tyrosine and serine/threonine kinase 135 410 IPR001245 GO:0004672|GO:0006468
Pumo8g01085 503 FunFam Serine/threonine-protein kinase BIK1 97 215 - -
Pumo8g01085 503 CDD STKc_IRAK 136 413 - -
Pumo8g01085 503 MobiDBLite consensus disorder prediction 55 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01085 Pumo-Chr8 40819044 40822507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01085 77 410 Glycoside Hydrolase AT3G07070 53.412 2.13e-117 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo8g01085 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01085 - - gmx:100787151 805.823