Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo8g01085 | ATGGGGTTGGGTGCTGAGAATGGTAAGGTGGTGGAGTCTTGGGATGTGTGTAAATCAAAGGGGAGGAAGAAGAAGAAGAAGGGGGATGAGGAAGTGGAAGGGGCTCAGGCTGGGTGTTGGGTCAGGCTGAGGTTTATTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGATACCTCAGTCAGTGGCAGTGGTACCAGTACTCATTATGCTGAAAGTAAATCAACTAATGATACTAGTAGAGACCAACCAACTGCTCCAGCAGTCTCTTCTACAACCACTAGCAATACAGAAAGCAATTCATCCACATCCAAACTTGAAGAAGAGCTTAAAATTGCTTCCAGGCTGCTTAAGTTCTCTTTCAATGATCTTAAGTTAGCAACAAGAAATTTTCGGCCCGAGAGTTTTCTTGGTGAAGGTGGGTTTGGTTGTGTTTTCAAGGGGTGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACGGTTGCTGTAAAAACCCTAAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGTGACCTAGTTCATCCGAACCTTGTTAAACTTGTAGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGGGGTAGCCTGGAAAATCACTTATTTAGGAGATCCATGCCTCTTCCATGGTCCATTAGAATGAAAATTGCACTAGGAGCTGCTAAGGGTCTTGCTTTTCTTCATGAAGAAGCTGAACGACCGGTTATATATAGGGATTTTAAAACTTCGAATATACTATTAGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGTCTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGTTATGCAGCACCGGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTCGGAGTGGTACTACTTGAGATGTTGTCCGGCAGAAGATCCATGGACAAACACCGACCCAACGGTGAGCATAACCTTGTGGAATGGGCTCGACCACATCTAGGAGAGAGGAGAAGGTTCTACAGGTTGATAGACCCTCGCTTGGAAGGCCATTTTTCGATAAAAGGAGCTCAGAAAGCTGCCCAACTGGCTGCTCACTGCCTTAGTAGAGATCCAAAAGCCAGACCCCTAATGAGTGAAGTTGTGGAAGCTTTAAAGCCTTTGCCAAACCTTAAGGACATGGCAAGCTCTTCATATTATTTCCAGGCAATGCAAGCTGACCGCTTTGGAGCGAGCCCAAACACAAGAAATGGGCGAACTGCAAGGAGCGTTGCTCACCCGCAATGGACAGCAGCAAAGGAGCCTTTCAATACCAAATGGTACTTATGCATCTCCATATCACCATCAGTTTCCCCAACCATCACCAAAACCCAATGGCAAAGCATAGAGCTGGTGAAAATTTTCTTTTTCTCTTTCACCCTTTACACCATTTCTTAG | 1512 | 0.4497 | MGLGAENGKVVESWDVCKSKGRKKKKKGDEEVEGAQAGCWVRLRFIGSCISSRSKVDTSVSGSGTSTHYAESKSTNDTSRDQPTAPAVSSTTTSNTESNSSTSKLEEELKIASRLLKFSFNDLKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSMPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLSGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQAMQADRFGASPNTRNGRTARSVAHPQWTAAKEPFNTKWYLCISISPSVSPTITKTQWQSIELVKIFFFSFTLYTIS | 503 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo8g01085 | 503 | MobiDBLite | consensus disorder prediction | 55 | 102 | - | - | |
Pumo8g01085 | 503 | ProSiteProfiles | Protein kinase domain profile. | 130 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo8g01085 | 503 | PANTHER | OS01G0588500 PROTEIN-RELATED | 94 | 413 | - | - | |
Pumo8g01085 | 503 | Gene3D | Transferase(Phosphotransferase) domain 1 | 216 | 431 | - | - | |
Pumo8g01085 | 503 | SUPERFAMILY | Protein kinase-like (PK-like) | 108 | 410 | IPR011009 | - | |
Pumo8g01085 | 503 | Gene3D | Phosphorylase Kinase; domain 1 | 89 | 215 | - | - | |
Pumo8g01085 | 503 | ProSitePatterns | Protein kinases ATP-binding region signature. | 136 | 168 | IPR017441 | GO:0005524 | |
Pumo8g01085 | 503 | FunFam | Probable serine/threonine-protein kinase PBL8 | 216 | 431 | - | - | |
Pumo8g01085 | 503 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 259 | 271 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo8g01085 | 503 | Pfam | Protein tyrosine and serine/threonine kinase | 135 | 410 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo8g01085 | 503 | FunFam | Serine/threonine-protein kinase BIK1 | 97 | 215 | - | - | |
Pumo8g01085 | 503 | CDD | STKc_IRAK | 136 | 413 | - | - | |
Pumo8g01085 | 503 | MobiDBLite | consensus disorder prediction | 55 | 104 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo8g01085 | Pumo-Chr8 | 40819044 | 40822507 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo8g01085 | 77 | 410 | Glycoside Hydrolase | AT3G07070 | 53.412 | 2.13e-117 | 350 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Pumo8g01085 | PK_Tyr_Ser-Thr | 1.9e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo8g01085 | - | - | gmx:100787151 | 805.823 |