Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01078 ATGCAGGATCAAAATCTCGAATCAGCTAAAGGGGAAAAGGGAGAGGCTAGAGAAGAAAACAAGATGTTAGAGTTCTTTGAAATCCTTCAACAACAAGATAAACCTGAAGATGCTACAAATGCTAAAGGTGTGTTTAGCCATGAGGAAAATGAAGAGAGTGAACTTGTGTCACTTTCTCTTGGGATAGCATATTCTAAAGGCAAGCCTAGCAAGGATGAGAAAAAGAATAACAATGGAATTGAAAAGAGAGAAGATATTGAGGATATGGATAAAGGACTAGCACTTGGGTTAGATATCAATTTGGTTCCTGTAGATCAAGATGAAGTTGCAAACAATTCCACCACTGAAAGTAGCTTTGGTGAGGGAGGGAAGGAAGAGGAACCAACTGAGATGTGGCCACCCAGTAAACTTTTGAAGACAATGAAAAGTTTGGATAAAAGTGAAGCTTCTCAACATGATCAGGTCAAGAAGACTAGGGTTTCTATTAGAGCCAGATGTGATACTCAAACGATGAATGATGGGTGCCAATGGAGAAAATATGGTCAGAAAATGGCAAAAGGAAATCCATGTCCCCGAGCTTACTATCGATGCACTGCTTCTCCATCTTGTCCTGTAAGAAAACAGGTGCAAAGATGTGCTGAAGACATGTCCATATTGATCACCACCTATGAAGGAACCCACAACCACCCACTTCCTATGTCAGCCACTGCAATGGCCTGCACAACTTCTGCTGCAGCTTCCATGCTCCAATCTCCCTCATTGAGTTCACAACATGGACTAGTCAATTCAGCTATATCCTCCATCATCAACTCTAGTGCCCCTAATTACAACCCTAATAATGCTCTAAACTTCTCCACACACCAAGTTTCAAGACCACACCAATTCTACTTCAACAACTCATCTATTTCAACCATGAATTCTCACCCCACAATCACTTTGGACCTTACAGCACCCCCAACTAATTCCTCAAACTCAAGCTTCACTTGCATGCCAAAATACTCATCTTCAACAAACCTTAATTTCTCCTCAGGTTTCTCTCCTCTACATTCTAGCATGCCTCAATCACCTTGGAGCAGTTATAGTGGTTACTTCAACTCTGGAACACTTTCTCAAAATAGAAACCATATTGGTGGTTACTTGTTAAACACTGCAAATCAAAATCAACCATCTCTAGGGCATCTCCATCAACCTGTTTACATGAGCAGCAATAACTTTTCTCAACAGTCTTTGCCTGATCCCATTGTTGCCGCAACCAAGGCAATCACAAGCAACCCAAAATTTCAATCAGCATTAGCAACAGCTCTCACAACATATGTTGGCAACAATGAAGATGGTGGTGGTAGGTTAAGGGAAAATCATGTTCTTGAGAGTGCAGCACTGAACTTAAAGCTATGTAGTGAAAATAGCATAGGATGTGCATCATCAAGGTACTTGAATATGTCTTCCTCTGCTCTAAACTCTCAACAAGGAAACTCAAGTATATTTCCACTACCACTACCGGAGCAATGGAAGTGA 1515 0.4112 MQDQNLESAKGEKGEAREENKMLEFFEILQQQDKPEDATNAKGVFSHEENEESELVSLSLGIAYSKGKPSKDEKKNNNGIEKREDIEDMDKGLALGLDINLVPVDQDEVANNSTTESSFGEGGKEEEPTEMWPPSKLLKTMKSLDKSEASQHDQVKKTRVSIRARCDTQTMNDGCQWRKYGQKMAKGNPCPRAYYRCTASPSCPVRKQVQRCAEDMSILITTYEGTHNHPLPMSATAMACTTSAAASMLQSPSLSSQHGLVNSAISSIINSSAPNYNPNNALNFSTHQVSRPHQFYFNNSSISTMNSHPTITLDLTAPPTNSSNSSFTCMPKYSSSTNLNFSSGFSPLHSSMPQSPWSSYSGYFNSGTLSQNRNHIGGYLLNTANQNQPSLGHLHQPVYMSSNNFSQQSLPDPIVAATKAITSNPKFQSALATALTTYVGNNEDGGGRLRENHVLESAALNLKLCSENSIGCASSRYLNMSSSALNSQQGNSSIFPLPLPEQWK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01078 504 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 5 444 IPR044810 GO:0003700
Pumo8g01078 504 MobiDBLite consensus disorder prediction 1 85 - -
Pumo8g01078 504 SUPERFAMILY WRKY DNA-binding domain 164 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo8g01078 504 FunFam probable WRKY transcription factor 31 156 233 - -
Pumo8g01078 504 SMART WRKY_cls 171 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g01078 504 ProSiteProfiles WRKY domain profile. 166 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g01078 504 MobiDBLite consensus disorder prediction 67 85 - -
Pumo8g01078 504 MobiDBLite consensus disorder prediction 106 131 - -
Pumo8g01078 504 MobiDBLite consensus disorder prediction 40 54 - -
Pumo8g01078 504 Gene3D WRKY domain 156 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo8g01078 504 Pfam WRKY DNA -binding domain 172 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g01078 504 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01078 Pumo-Chr8 40696171 40698481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01078 7 442 WRKY Transcription Factor Family AT5G15130 38.784 6.65e-63 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo8g01078 WRKY 2.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01078 - - gmx:100797911 750.74