Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01071 ATGAAGAATTTCTTGGTTTCTTTGTACTACTTGTTTCCTGCAATCATTCTTGTGCTGCTCACTCCAATTCCCAGTGCACAGCTAACTACAAGTGAGAACAGAATCCTTCTCCAAGTTCAGAAGCTTCTTGAATATCCTCAAGTTCTTCAGGGATGGACCAACTTGACCAACTTCTGCTCCCTCCCTCCCTCTCCTTCTCTCAACATTGTGTGCTCCAATGGCCATGTAACTGAGTTAACCATCATTGGGAACAAGACCTCCCCTTCCTCTCACACAACCCAATTTTTGTCTTGGAATTCATCTGAGACTCTCTCAGAAAGATTCTCCATTGAGTCTTTCTTTACTTTCTTGACAAAGCTCTCAAATCTGAAGGTGTTGTCATTGATGTCACTTGGTTTGTGGGGTCCTTTGCCTTCCAAGATTGACAGGTTCTGGTCTCTTGAGGTGATGAACTTTAGCTCAAACTTCATTTATGGGGAAATCACACCATCAATCTCCTCTTTGAAGAATCTCAGGAGTCTTGTTTTGGCTGATAATCTTTTCAATGGGAGTGTACCTGATCTTGGAAAACTGGCTTCTCTTGAAGAGCTAAATTTGGGAGGCAACAAATTGGGTCCTGAATTCCCTTCATTGAGCAAGAATCTTGTGAGGGTTATCTTGAGAAACAACTCTTTGAGATGTAGAATCCCTCCCCAACTCATGCATGTTTATAAACTTCAGCTGTTTGACATCTCTTCCAATGTGATATTTGGAAATATCCCATCATTTATTTTCTCTCTTCCCTTCCTCAAGTACCTAAACTTGGCTTCAAACCAATTAAGTGGCTCCCTTTCTGTGAATGTGTCATGTAGTTCTGCTCTCACATTTGTTGACATCTCACACAACCTCTTGGTGGGAACATTGCCATCTTGTATTGGTTCAAAGTCTTCAAATCGAACAACACTTTATTTTGGGAATTGTTTGTCAATCAGAAGCTTAAATGATCAATATCCATCTTCTTATTGCCAGAAAGTGGAGGCCTTAGCTGTTAAGCCATCAATTAAAACCCAGAAGAAGGAACCAGATATGCAACTAGGCCTAATACTTGGTATTATTGGAGGTGTTGTGGGAATTGCAGGGCTTCTGGTTCTTCTCATTTGGTGCATCTTCAGAAAGTCCAAACCAGAAAAAGCAGACAGTAATTATAACAAAGGCATCTCTGCTCCAGATAATTTTTCTGTCCGTGCATATCCAAGACCAAATATTAATGCAAGACGTCCTCCTCTACCAATGAGGCAACCTGTTCTTGGATACCCACCATACTGCATTTTCTCATTAGAAGAAATTGAAGATGCTACAAACAACTTTGACCCATCAAATCTTATAGCAGAAGGATCACAGGGACAGCTATATAAAGGTTGGCTCATAGATGGTTCAATGGTCATGGTCAATCGTGTGAAACTAAAGCAGAAAAGTTTGCACAAAAACAGTATTCAGAGCTTGAAGGTGTTACCCTATTTGAGGCACAGGCATTTGGTGAGTGTTCTAGGACACTGTGTCATTACTCATCAGGACCGTCCCCAAATGATAAGCACAATATTCATTGTATTTGAACATGTCTCGAACGTGTCATTGAGGGATTACCTTGCAGATAGGAGAAAAAGGGAAATGCTGAAATGGCCACAAAGAATGGTAATCAGCATAGGCATTGCAAGAGGAATCCAGTTCTTACACACCAGAGTTCATCCTGGCATATTTGGAAACAATATAAAGATTGAGAATATTCTGTTGGATGATAGCCTCAATGCAAAAGTTAGTGGATACAGCATTCCATGGCCACCCAAGAAAGGTCATGACAGCAAACTTTATGAACAAAGAGCCCCCAATCGAATTGGCAGCATTAATGATGCAGAAAAGGAAGACATCTATCAGTTTGGTGTTATTCTACTTGAAGTTATCACTGGCAAACTAATTACATCTTCCAGTGAAGTAGAGGAGCTGAAGGATGAGCTGGAGAGAGGTTTAGCAGAAGCTGCATCACCATCTCTAAGGGGTGCATCACCATCTCTAAGGGGTGCATCACCGATACTAAAGGGCATGTTTGATTCTTCCCTCTGGGAGACTTGTGTGTATGAATCATTGAAGACTGCAGTTCAGATCACCATCAGTTGTCTCAGCAAGATTTCCAGTAATCGCCCTTCAATAGAGGATATTCTCTGGAATTTGCAGTACTCCATGCAAGTTCAAGAGCCAAGGACCAGCGGTGTACACCTCTTTACAAAAATGTAA 2268 0.4123 MKNFLVSLYYLFPAIILVLLTPIPSAQLTTSENRILLQVQKLLEYPQVLQGWTNLTNFCSLPPSPSLNIVCSNGHVTELTIIGNKTSPSSHTTQFLSWNSSETLSERFSIESFFTFLTKLSNLKVLSLMSLGLWGPLPSKIDRFWSLEVMNFSSNFIYGEITPSISSLKNLRSLVLADNLFNGSVPDLGKLASLEELNLGGNKLGPEFPSLSKNLVRVILRNNSLRCRIPPQLMHVYKLQLFDISSNVIFGNIPSFIFSLPFLKYLNLASNQLSGSLSVNVSCSSALTFVDISHNLLVGTLPSCIGSKSSNRTTLYFGNCLSIRSLNDQYPSSYCQKVEALAVKPSIKTQKKEPDMQLGLILGIIGGVVGIAGLLVLLIWCIFRKSKPEKADSNYNKGISAPDNFSVRAYPRPNINARRPPLPMRQPVLGYPPYCIFSLEEIEDATNNFDPSNLIAEGSQGQLYKGWLIDGSMVMVNRVKLKQKSLHKNSIQSLKVLPYLRHRHLVSVLGHCVITHQDRPQMISTIFIVFEHVSNVSLRDYLADRRKREMLKWPQRMVISIGIARGIQFLHTRVHPGIFGNNIKIENILLDDSLNAKVSGYSIPWPPKKGHDSKLYEQRAPNRIGSINDAEKEDIYQFGVILLEVITGKLITSSSEVEELKDELERGLAEAASPSLRGASPSLRGASPILKGMFDSSLWETCVYESLKTAVQITISCLSKISSNRPSIEDILWNLQYSMQVQEPRTSGVHLFTKM 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01071 755 Gene3D Transferase(Phosphotransferase) domain 1 533 749 - -
Pumo8g01071 755 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 110 736 - -
Pumo8g01071 755 Gene3D Ribonuclease Inhibitor 29 212 IPR032675 -
Pumo8g01071 755 Gene3D Phosphorylase Kinase; domain 1 425 522 - -
Pumo8g01071 755 ProSiteProfiles Protein kinase domain profile. 449 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g01071 755 Gene3D Ribonuclease Inhibitor 213 356 IPR032675 -
Pumo8g01071 755 Pfam Protein tyrosine and serine/threonine kinase 454 667 IPR001245 GO:0004672|GO:0006468
Pumo8g01071 755 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 533 750 - -
Pumo8g01071 755 SUPERFAMILY L domain-like 86 329 - -
Pumo8g01071 755 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 29 212 - -
Pumo8g01071 755 SUPERFAMILY Protein kinase-like (PK-like) 423 735 IPR011009 -
Pumo8g01071 755 FunFam Putative LRR receptor-like serine/threonine-protein kinase 213 345 - -
Pumo8g01071 755 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 422 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01071 Pumo-Chr8 40673290 40676837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01071 26 661 Miscellaneous Gene Families AT2G02780 49.924 6.02e-179 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pumo8g01071 PK_Tyr_Ser-Thr 4.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01071 - - gmx:100800018 1307.74