Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01061 ATGCTACAAAAAAAAAATGAAAACTACCAACAGAGAAAACTTTCAATTTTTGGTTTTGTGACTTTGGGATGGTTGACTCTAATTTTAGGAGCTGAAAAGGTGGAAAATCTAACATTGGACGAAATGTGGATTCGAGGATTCAGTTTTTGGATCAAAGGTTGCACTTTGCTGGCCTTAATATCTCTAATTTCCGCTCTGGAACCCGAACTGGGATCGACTCGCGTTGTCTTTCAGACAAAGTATGGGGATATTGAATTTGGTTTCTATCCAACTGTTGCACCCAAAACTGTTGACCACATTTTTAAGCTCGTGCGACTTGGAGGCTATAACACTAACCATTTCTTTCGGGTGGATAAGGGATTTGTGGCCCAAGTAGCAGATGTTACAAATGGAAGATCGGCTCCCATGAATGAGGAACAAAGAAGAGAAGCTGAAAAGACTGTTGTTGGTGAATTTAGTGAAGTCAAACATGTTCGTGGTATTCTTTCCATGGGAAGATATGATGATCCAGACAGTGCTTCATCCTCATTTTCAATACTACTTGGAGATGCTCCTCATCTTGATGGCAAGTATGCAATATTTGGAAAAGTTACTAAAGGTGATGAAACGTTGACAAAGCTTGAGCAACTACCTACCCGTAAAGAGGGTATATTTGTAATGGTATACTTGAAAATCTTATCCATCTTGTGCTTTGTTCTTTTTTCCCACCATTTAATGTTCAATCTTGGATCATATACATAG 741 0.3873 MLQKKNENYQQRKLSIFGFVTLGWLTLILGAEKVENLTLDEMWIRGFSFWIKGCTLLALISLISALEPELGSTRVVFQTKYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVTNGRSAPMNEEQRREAEKTVVGEFSEVKHVRGILSMGRYDDPDSASSSFSILLGDAPHLDGKYAIFGKVTKGDETLTKLEQLPTRKEGIFVMVYLKILSILCFVLFSHHLMFNLGSYT 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01061 246 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 82 216 IPR002130 GO:0000413|GO:0003755
Pumo8g01061 246 SUPERFAMILY Cyclophilin-like 74 226 IPR029000 -
Pumo8g01061 246 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 75 214 IPR002130 GO:0000413|GO:0003755
Pumo8g01061 246 Gene3D - 64 228 IPR029000 -
Pumo8g01061 246 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 88 103 IPR002130 GO:0000413|GO:0003755
Pumo8g01061 246 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 175 IPR002130 GO:0000413|GO:0003755
Pumo8g01061 246 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 189 204 IPR002130 GO:0000413|GO:0003755
Pumo8g01061 246 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 126 IPR002130 GO:0000413|GO:0003755
Pumo8g01061 246 CDD cyclophilin 76 227 - -
Pumo8g01061 246 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 56 226 IPR044233 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01061 75 232 U-box Gene Family AT5G67530 29.518 3.61e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01061 - - gmx:100819238 345.125