Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01034 ATGCATGAGTATAGATTAATTGGATCAAGAAGACAAGCCAATAGACAAATTGGATCCATGAGGCTAGATGACTGGGTCTTGTGTAGGATCTATAAGAAGAAGAACATAGGAAAATCAATGGAGGCAAGAGAGGACTACCCAATAGCCCAAATCAATCTTACACCACCTGCAAACAATGACAGTGAACAAGAAATGGTGAAATTTCCAAGGACTAGTTCCCTTACTCATCTTTTGGATATGGATTACTTGGGTCCAATGTCACATTTACTATCTGATGCCTCATACAATTCAACCTTTGATTTTCAAATTAACACTGCCAATGGTGGAATTGACCCGTTCATAAAACCACAGCCTGTGGAAATGCCTAACAACCCTTATGCTGCAGATTCAGGGAAGTACCAAGTGAAACAGAATAGCACCATCAACCCCACGATATTTGTGAACCAAGTGTATGATCAAAGAGGATAA 468 0.3974 MHEYRLIGSRRQANRQIGSMRLDDWVLCRIYKKKNIGKSMEAREDYPIAQINLTPPANNDSEQEMVKFPRTSSLTHLLDMDYLGPMSHLLSDASYNSTFDFQINTANGGIDPFIKPQPVEMPNNPYAADSGKYQVKQNSTINPTIFVNQVYDQRG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01034 155 Gene3D NAC domain 1 37 IPR036093 GO:0003677|GO:0006355
Pumo8g01034 155 ProSiteProfiles NAC domain profile. 1 33 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01034 Pumo-Chr8 38634650 38635328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01034 1 89 NAC Transcription Factor Family AT1G69490 44.000 2.84e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01034 - - gmx:100170717 285.034