Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01024 ATGCCGCCGATACTGGAACTCTCCCTCCCAAAACCCTTCCAAGTGAGACCCACCGTTCAATTTTCGCGCCAACCAAACCCCCCGACCACAACCTCGGACCGTGGCCTCGTATTCCACGAAAAGGTGAAATACCTCAAAACCCTCAAAGTGAACCCCGACAAAGCGTTCCGCTTGAACCCCACTCTCCGTTCATCCCCTCTCTCAACCCTCAAATCGGTGACGCGGTGCCTTTCCTCGTTGGGCATTCCACGCGCCGCCATGGGGCGCATCCTCGACATGCTCCCCGTGCTCCTCACGTGCGACCCTTATTCCCAATTCTACCCCTTCCTCGACTTCCTCCTCCACGAGGTCCCAATCCCCTACCCCGACGTCCACCTCTCTATCCTGCGCTGCCCCAGATTACTCGTTTCCAGCGTTGACCACCAATTGCGACCAACGTTACACTTTCTGAGGGAATTAGGGTTCAGTGGGGCCCACTCGCTCACGTGCCAGACCACCCTGCTGCTCGTGTCCAGCGTGGAGGACACCCTCTTGCCCAAGATTGAGTTTTTGAAGGGTTTGGGGTTCACCCATGAAGAAGTATCCAACATGGTCGTGAGGTCCCCTGGGTTGTTGACTTTCAGCGTTGACAAGAATTTGGTGCCCAAGGTGGAGTTTTTCTTGAAGGAGATGAATGGGGATGTTGCTGAGCTCAAGAGGTTTCCGCAGTACTTCTCTTTTAGCTTGGAACGGAGGATTAAGCCGCGCTACGGGGTGCTGAGCCGGCTTGGCGTGGCGATGCCGTTGGAAGACATGTTGAAGGGAACGTTGAGAAAAATTGCAGTAGGGTCGACCAATTTAATGATTATTCTGATCTGA 858 0.5455 MPPILELSLPKPFQVRPTVQFSRQPNPPTTTSDRGLVFHEKVKYLKTLKVNPDKAFRLNPTLRSSPLSTLKSVTRCLSSLGIPRAAMGRILDMLPVLLTCDPYSQFYPFLDFLLHEVPIPYPDVHLSILRCPRLLVSSVDHQLRPTLHFLRELGFSGAHSLTCQTTLLLVSSVEDTLLPKIEFLKGLGFTHEEVSNMVVRSPGLLTFSVDKNLVPKVEFFLKEMNGDVAELKRFPQYFSFSLERRIKPRYGVLSRLGVAMPLEDMLKGTLRKIAVGSTNLMIILI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01024 285 Gene3D Transcription termination factor 3, mitochondrial 39 272 IPR038538 -
Pumo8g01024 285 PANTHER CGI-12 PROTEIN-RELATED 59 266 IPR003690 GO:0003690|GO:0006355
Pumo8g01024 285 Pfam mTERF 55 267 IPR003690 GO:0003690|GO:0006355
Pumo8g01024 285 SMART mt_12 88 120 IPR003690 GO:0003690|GO:0006355
Pumo8g01024 285 SMART mt_12 159 190 IPR003690 GO:0003690|GO:0006355
Pumo8g01024 285 SMART mt_12 53 83 IPR003690 GO:0003690|GO:0006355
Pumo8g01024 285 SMART mt_12 228 259 IPR003690 GO:0003690|GO:0006355
Pumo8g01024 285 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Pumo8g01024 285 SMART mt_12 195 227 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01024 Pumo-Chr8 38459002 38465707 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo8g01024 mTERF 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01024 K15032 - gmx:100785219 449.899