Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01010 ATGCGCCGATCGAATGCCCGCACTCGCGCCGACTCGAATTCGAATCTCAACAACAACAAAGAAATGGATCCGATCAAAAAAACCCGCTCCACCAACCTCTTCGCTCGCAACCCTAAGCCCTCGCAATCGAGGTCCCTCCGTTGCGTAATCCTCGTCTCCCTCTCCCTCTCCCTCATCTTCCTTCTCTCCTACTACGCCTTCTCCTCGTCGGAGACTAATTTCCGGTACCGGATCATCGTGGACGGCGGGAGCACCGGGACGCGCGTGCACGTGTTCAGGTACAGGTCGGGGAGGGCGCTGGAGTTCGGGAGGGAGGGTTTAAAGTCGATGCGGGTGAACCCGGGGCTGTCGGCGTTCGCGGAGGAGCCGGAGGGCGCGGGCGGGTCGGTGTCGGAGCTGGTGGAGTTCGCGAAGGGGAGGATCCCGAGGGAGAGCTGGGGGGAGACGGAGATTCGGCTGATGGCCACGGCGGGGTTGAGGATGCTCGACGCGGCGGCGCAGGGGAAGATTCTGGAGTCGTGTAGGAAGGTGCTGCGTAAGTCCGGGTTCAGGTTTAGGGACGAATGGGCTTCTGTTATCACAGGTTCTGATGAAGGAGTGTATGCTTGGGTTGTTGCTAATTATGCACTTGGTACTCTTGGAGGTGATCCTTTGGATACAACTGGGATTATTGAACTTGGTGGTGCTTCTGCTCAGGTGACCTTTGTATCAAGAGAAGCGGTGCTGCCTTCATTCTCGCGAACTGTTAAATTTGCGAATACCACTTACAACCTTTACAGCCACAGCTTTCTTCATTTTGGCCTGAATGCTGCTCATGACTCATGGAAAGAAGCACTTGCATTGGGAGAATTTAACTTGGCTTCTCAATCTCTTCATGAAGGGTTGCGGATAGATCCTTGTACTCCTACAGGATACTCTTATAACGTTGAGTCGTGGAAGTTCCCTCCTAGCTCAGAGAGTGAAAAAAAGCAATATCAGTCCATTGTCCAAACAAGGGGGAACTTTTCAGAGTGCAGATCTGCAGCACTTATGCTGCTACAGAAAGGGAAAGAATCATGTTCCTATCAGCATTGTGACATAGGATCAACTTTCATACCAAAGCTTCAGGGGAAATTTTTGGCCACAGAAAATTTCTTTTACACATCAAAGTTTTTTGGATTGACGCCAAGGGCCTATCTGTCCAAGTTGATGAGTGCTGGGCAAGAATTCTGTGGAGAGGATTGGTTAAGGCTGAAGAAAAAATATGTCTCCCATGACGAGGAAGATTTACTTCGGTATTGCTTCTCTTCAGCATACATTGTTGCTTTGCTTCACGACAGTCTTGGAATTGCTTTGGATGATGAGAGGGTCAAGGTTGCTAATCAGGTGGGAAGTATTCCGCTTGATTGGGCTTTGGGAGCTTTTATTCTGCAAACAGCAGCTGATGCAGATATACAGAACCATAACTGGATTGCCACCATTTTCAGTGGAAGAAACCTCAGTTGA 1485 0.503 MRRSNARTRADSNSNLNNNKEMDPIKKTRSTNLFARNPKPSQSRSLRCVILVSLSLSLIFLLSYYAFSSSETNFRYRIIVDGGSTGTRVHVFRYRSGRALEFGREGLKSMRVNPGLSAFAEEPEGAGGSVSELVEFAKGRIPRESWGETEIRLMATAGLRMLDAAAQGKILESCRKVLRKSGFRFRDEWASVITGSDEGVYAWVVANYALGTLGGDPLDTTGIIELGGASAQVTFVSREAVLPSFSRTVKFANTTYNLYSHSFLHFGLNAAHDSWKEALALGEFNLASQSLHEGLRIDPCTPTGYSYNVESWKFPPSSESEKKQYQSIVQTRGNFSECRSAALMLLQKGKESCSYQHCDIGSTFIPKLQGKFLATENFFYTSKFFGLTPRAYLSKLMSAGQEFCGEDWLRLKKKYVSHDEEDLLRYCFSSAYIVALLHDSLGIALDDERVKVANQVGSIPLDWALGAFILQTAADADIQNHNWIATIFSGRNLS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01010 494 CDD NBD_sugar-kinase_HSP70_actin 78 258 - -
Pumo8g01010 494 Gene3D - 75 469 - -
Pumo8g01010 494 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 45 476 IPR000407 GO:0016787
Pumo8g01010 494 Pfam GDA1/CD39 (nucleoside phosphatase) family 70 473 IPR000407 GO:0016787
Pumo8g01010 494 Gene3D Exopolyphosphatase. Domain 2 194 457 - -
Pumo8g01010 494 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01010 Pumo-Chr8 38247492 38254129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01010 40 473 Nodulin-like Gene Family AT4G19180 27.719 5.17e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01010 K01510 - gmx:100807287 843.573