Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01004 ATGCTGCCTAAGGCTAGCTGTGGCACACGGTGGTCAGCGGGTGATCTTCATAAATACCTCAAGGACATAGGTGCACTTAGTCCTTCAACAGCCATCAACTTTGGCTTGGATATTGCTAGAGGGATGGCCTATCTTCACAATGAACCAAATGTTATCATTCATCGAGACCTAAGGGCAAGGAATGTTCTTTTGGTCAACTCTAGTGCTGACCATTTAAAAGTTGGTGATTTTGGACTTAGTAAGCTTATTAAGGTCCAAAGTTCTCATGACGTATACAAGATGACGGGTGAAACTGGAAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGATGTGTTCTCCTTTGCAATGATTCTGTATGAGATGCTTGAAGGTGAACCCCTTTTTTCAAATTACGAACCTTATGAAGGAGCCAAATATGTGGCAGAAGGACACAGGCCTTCTTTTAGGGCAAAGGGTTATACCCCTGAACTGCGAGAGTTAACAGAGCAGTGTTGGGCTGCAGACATGAATCAAAGACCTTCATTCATAGAGATCCTTAAACGGCTTGAAAAGATCAAGGAAAATTTGCCTTCAGATCATCACTGGCACTTGTTCACTTCATGA 630 0.4302 MLPKASCGTRWSAGDLHKYLKDIGALSPSTAINFGLDIARGMAYLHNEPNVIIHRDLRARNVLLVNSSADHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPLFSNYEPYEGAKYVAEGHRPSFRAKGYTPELRELTEQCWAADMNQRPSFIEILKRLEKIKENLPSDHHWHLFTS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01004 209 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 13 196 - -
Pumo8g01004 209 Pfam Protein tyrosine and serine/threonine kinase 13 191 IPR001245 GO:0004672|GO:0006468
Pumo8g01004 209 SMART tyrkin_6 1 191 IPR020635 GO:0004713|GO:0006468
Pumo8g01004 209 SUPERFAMILY Protein kinase-like (PK-like) 12 205 IPR011009 -
Pumo8g01004 209 Gene3D Transferase(Phosphotransferase) domain 1 12 205 - -
Pumo8g01004 209 ProSitePatterns Tyrosine protein kinases specific active-site signature. 52 64 IPR008266 GO:0004672|GO:0006468
Pumo8g01004 209 FunFam Integrin-linked protein kinase family 12 207 - -
Pumo8g01004 209 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01004 Pumo-Chr8 36004016 36028603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01004 13 209 MAP Kinase Kinase Kinase AT1G14000 83.756 2.23e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pumo8g01004 PK_Tyr_Ser-Thr 2.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01004 - - gmx:100789273 380.563