Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00994 ATGGCTGGCGGCGGAAGTGGGGACCGACCGCCGTGGAAGGAGGCGGCGCCGCCGCGACCCACCATCACTCTGCCACCGCGGTCCGGTTCCATGGAGACCCTTTTTAATGGCGGCTTCAGCCCTGGTCCCATGACTCTGCTTTCTGGCTTTTTGGGTGATGGGGATGATGGAAAGTCCTTCTCTCAGCTCCTCGCCGGAGCTATGGCTTCTCCGGTGGCCGGAGGTGTCGCCGGCGTGATGGACTCGCCTGACCTCTTTTCACCTTCTCAGGTGTCTTTTGGAATGACACACCAGCAGGCCCTAGCACAGGTCTCAGCTCAGGCTTCACAAGCCAACTCAAATATGCATATCCAATCTGTATCAGCTACCTCATTGACACAGGTTCCTGCAGCTACTTCCAATACAACACAACAGCTGATTCCACCCTTAAATGCAGACTCTTGGGCCACAATGACCGAATCGGCTGATCATTCTCACTCTGAACAAAGACAGCAGTCGTCATCGTTGAATGTTGATAAGCCTGCGGATGATGGCTACAACTGGAGGAAGTACGGCCAGAAACAGGTGAAGGGTAGTGAGTTTCCTCGAAGTTATTACAAGTGCACGCATCCAAACTGTCCTGTCAAGAAAAAGGTCGAGCGCTCACTTGAGGGTCATGTAACTGCAATTATTTATAAAGGAGAACACAACCATCAATGTCCTCATCCTAACAAGCGCTCAAAAGACACCATGAATTCAAATGAAAATTCAAATATGCAAGGGAATGTAGATTCAACTTATCAAGGGACGACTACGAATTCGATGTCTAAGATGGATCCAGAGTCAAGTCAGGCAGCAGCTGATCGTCTATCAGGAACAAGTGACAGCGAGGAAGTAGGTGATCATGAAACTGAAGTGGATGAGAAAAATGTTGAGCCTGACCCCAAGAGAAGAAAAACAGAAGTCACGCACTCAGATCCAGCTTCTTCACATAGGACTGTCACTGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTCTTAGATGATGGGTATAGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCTTATCCTAGGAGCTATTACAAATGTACAACCCCAGGTTGTAATGTCCGAAAGCATGTGGAGAGGGCTTCAACAGATCCTAAAGCTGTCATAACAACATATGAAGGAAAACACAATCATGATGTGCCTGCAGCTAAGACTAACAGCCACACTATGGCCAGCAATACTGCATCACAGTTGAAATCACAGAACACCAATCCTGAGAAGCATAGTTTTGGCAGCAGAGATATGGGGGGAAATGAACAACAGCCGGTCGCACGGCTTCAGTTGAAGGAAGAGCAGATCACCTAG 1371 0.4843 MAGGGSGDRPPWKEAAPPRPTITLPPRSGSMETLFNGGFSPGPMTLLSGFLGDGDDGKSFSQLLAGAMASPVAGGVAGVMDSPDLFSPSQVSFGMTHQQALAQVSAQASQANSNMHIQSVSATSLTQVPAATSNTTQQLIPPLNADSWATMTESADHSHSEQRQQSSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLEGHVTAIIYKGEHNHQCPHPNKRSKDTMNSNENSNMQGNVDSTYQGTTTNSMSKMDPESSQAAADRLSGTSDSEEVGDHETEVDEKNVEPDPKRRKTEVTHSDPASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTMASNTASQLKSQNTNPEKHSFGSRDMGGNEQQPVARLQLKEEQIT 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00994 456 SUPERFAMILY WRKY DNA-binding domain 335 403 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo8g00994 456 MobiDBLite consensus disorder prediction 400 456 - -
Pumo8g00994 456 MobiDBLite consensus disorder prediction 287 319 - -
Pumo8g00994 456 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 427 IPR044810 GO:0003700
Pumo8g00994 456 FunFam WRKY transcription factor 158 235 - -
Pumo8g00994 456 MobiDBLite consensus disorder prediction 227 328 - -
Pumo8g00994 456 FunFam WRKY transcription factor 33 330 396 - -
Pumo8g00994 456 SMART WRKY_cls 343 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g00994 456 SMART WRKY_cls 175 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g00994 456 MobiDBLite consensus disorder prediction 405 431 - -
Pumo8g00994 456 Pfam WRKY DNA -binding domain 344 400 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g00994 456 Pfam WRKY DNA -binding domain 176 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g00994 456 Gene3D WRKY domain 328 404 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo8g00994 456 Gene3D WRKY domain 157 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo8g00994 456 ProSiteProfiles WRKY domain profile. 338 403 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g00994 456 MobiDBLite consensus disorder prediction 152 173 - -
Pumo8g00994 456 ProSiteProfiles WRKY domain profile. 176 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g00994 456 SUPERFAMILY WRKY DNA-binding domain 173 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo8g00994 456 MobiDBLite consensus disorder prediction 1 30 - -
Pumo8g00994 456 MobiDBLite consensus disorder prediction 152 181 - -
Pumo8g00994 456 MobiDBLite consensus disorder prediction 243 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00994 Pumo-Chr8 35799986 35804169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00994 19 64 WRKY Transcription Factor Family AT2G03340 62.500 4.78e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo8g00994 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00994 - - gmx:100127369 836.254