Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00962 ATGGAAGACAAGGACAGAGCAGCCTCCGATCCTGCCGCCGCCACGGCTGACTTCGCCGGCGACACCAGTTGGACACTCGCCGCCGATGACTCCGACGGCGCGTACCTGTTCTCCGGCGACCGGGAGCGGAGCATACTCAGGGAATTCGGGTGGAACCTCGAACCGGACCAGCCGAACCGGATCAGCACCGACGACGGATTGTGGATGCCGGTTCAGTCCTCTCTGGCCGGTTCGATCGAACCGGCCGGCGCGGCGGCGTCGTCGCGGTCGAATAACCAATCGGTCTCTTCCAGCTCCAGCGAGGATCCGCCGGAGAAATCAACCGTCTCCGACGAGAAACCGCCTGAGACACCGAGTAAAGGTAAAAAGAAGGGGCAAAAGCGAATACGGCAGCCACGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGGAAGTATGGTCAGAAGGCAGTTAAAAATAGCCCATTCCCTAGGAGCTACTACCGGTGCACAAACAGCAAATGCACGGTGAAGAAGAGGGTTGAACGCTCTTCCGAGGACCCAACGATTGTGATTACGACATATGAAGGCCAACACTGTCATCACACCGTTGGATTTCCTCGAGGGGGAATCATTAGTCATGAAGCTGCATTTGCGGGCCAGTTGGCTCCAACAATGTCACAGTTTTATTATCCAATTCAATTACCCAGAGAGAATAATAATAATACTTTCAGCTCTATTTCTCAGCCATGCCAAGCACAGGATGGAGCTGGAGGAGGGTCAAGTGCTACGATGCCAGCTGATGCATCGTCACAGTCACAACCTCCCACGGATGAAGGGTTGCTTGGAGATATTGTACCCCCGGGAATGCGCATCAGATGA 885 0.5435 MEDKDRAASDPAAATADFAGDTSWTLAADDSDGAYLFSGDRERSILREFGWNLEPDQPNRISTDDGLWMPVQSSLAGSIEPAGAAASSRSNNQSVSSSSSEDPPEKSTVSDEKPPETPSKGKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIISHEAAFAGQLAPTMSQFYYPIQLPRENNNNTFSSISQPCQAQDGAGGGSSATMPADASSQSQPPTDEGLLGDIVPPGMRIR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00962 294 SMART WRKY_cls 145 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g00962 294 SUPERFAMILY WRKY DNA-binding domain 137 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo8g00962 294 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 241 IPR044810 GO:0003700
Pumo8g00962 294 MobiDBLite consensus disorder prediction 242 279 - -
Pumo8g00962 294 ProSiteProfiles WRKY domain profile. 140 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g00962 294 FunFam WRKY transcription factor 57 131 205 - -
Pumo8g00962 294 MobiDBLite consensus disorder prediction 242 294 - -
Pumo8g00962 294 Gene3D WRKY domain 132 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo8g00962 294 Pfam WRKY DNA -binding domain 146 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g00962 294 MobiDBLite consensus disorder prediction 84 104 - -
Pumo8g00962 294 MobiDBLite consensus disorder prediction 105 122 - -
Pumo8g00962 294 MobiDBLite consensus disorder prediction 72 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00962 Pumo-Chr8 35223480 35230587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00962 21 292 WRKY Transcription Factor Family AT1G69310 51.877 9.14e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo8g00962 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00962 - - gmx:100170676 481.485