Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00942 ATGAACATGTTTTTTTCTCTGTCCATTGGCTCTTCTGCTGCATTGCCCCCCCTCAGATGCACCTCCAAACTCACTTCTTTCAGGGCTGTTGCTGCTGCTGATGATGATCATGGCTTCCCTTCGTTTCTCCCCAGAGAGGTTCACACCATCCAAGACCCTTTTGCCAGAAAACTCGCCTTAAGGATTCAGAGGCTACCCGTGCCTGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAGCCACTGGTGCAGAGCAAGGAAACCCCAGTTGTTCTTCTACATGGTTTTGACAGCTCATGTTTAGAGTGGAGATATGTATTACCATTGCTTGAGGAATCTGGTATTGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCTTGTGATGTGGTTTCAAAGCGTGATCACTTCTACCAGTTTTGGAAGTCCTACATCAGAAGGCCAATGATATTGGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACATTGCGGTCAATTATCCAGAAGCTGTGGAGAAGCTTGTTCTGATTGGTGCTAGTGTATATGCAGAGGGAACTGGAAAGCTAGCAACCTTACCCAAAGCAGTAGCATATGCCGGGGTTAATTTATTGAAGAGTGTTCCATTACGCTTATATGCCACCTATTTGACCTTCACAAAGATTTCCTTCAGCACTAGCCTTGATTGGACTAATGTGGGCCGCATGCATTGTTTATTGCCTTGGTGGGATGATGCTACTGTGGATTTTATGACAAGTGGGGGTTACAATGTTGCTCCTTTGATAGGAAAGGTATATGAAGCTTTCCAAGTTGTTGATGAGTGCTGTATTTATTATGTTATTTTTATGGCGTTTGGACTAGAGAATTCCTTTAAAACAGATGAATAG 918 0.4401 MNMFFSLSIGSSAALPPLRCTSKLTSFRAVAAADDDHGFPSFLPREVHTIQDPFARKLALRIQRLPVPVRFSENPIMSSCVKPLVQSKETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLEKLPPCDVVSKRDHFYQFWKSYIRRPMILVGPSLGSAVAIDIAVNYPEAVEKLVLIGASVYAEGTGKLATLPKAVAYAGVNLLKSVPLRLYATYLTFTKISFSTSLDWTNVGRMHCLLPWWDDATVDFMTSGGYNVAPLIGKVYEAFQVVDECCIYYVIFMAFGLENSFKTDE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00942 305 Gene3D alpha/beta hydrolase 83 267 IPR029058 -
Pumo8g00942 305 SUPERFAMILY alpha/beta-Hydrolases 89 232 IPR029058 -
Pumo8g00942 305 PANTHER HYDROLASE 22 275 - -
Pumo8g00942 305 PRINTS Alpha/beta hydrolase fold signature 175 188 IPR000073 -
Pumo8g00942 305 PRINTS Alpha/beta hydrolase fold signature 161 174 IPR000073 -
Pumo8g00942 305 PRINTS Alpha/beta hydrolase fold signature 116 131 IPR000073 -
Pumo8g00942 305 Pfam Serine aminopeptidase, S33 90 199 IPR022742 -
Pumo8g00942 305 PRINTS Epoxide hydrolase signature 175 188 IPR000639 GO:0003824
Pumo8g00942 305 PRINTS Epoxide hydrolase signature 96 114 IPR000639 GO:0003824
Pumo8g00942 305 PRINTS Epoxide hydrolase signature 116 131 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00942 Pumo-Chr8 34956672 34962130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00942 91 231 Acyl Lipid Metabolism Gene Families AT3G10840 28.387 8.55e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00942 - - gmx:100792060 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00942 8 34956672 34962130 Pumo8g00942 8 34956672 34962130 ECH