Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00919 ATGACGGGAAGGCATCAATCGATAACGACGAAGGTTTCGACGAGTTCGATCCCTGATAGTGTTACCAGAGAGGACCCTACGACCAAATACGAATTGCTCAATGAACTTGGGAAGGGTTCCTATGGAGCTGTATACAAAGCAAGGGATTTGAGAACCTCGGAGATGGTTGCAATTAAAGTAATATCGTTATCTGAAGGGGAGGAGGGATATGAGGAAATCCGTGGTGAGATTGAGATGTTACAACAATGTAATCATCCAAATGTTGTCCGGTATCTTGCAAGCTATCAGGGAGAAGAGTACCTTTGGATAGTGATGGAGTATTGTGGCGGTGGTAGTGTTGCTGATTTGATGAGCGTGACTGAAGAGCCACTGGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGTCTTGATTATTTGCACTCAATTTTTAAAGTCCATAGAGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACAAGGACTATGTCAAAGCGCAATACGTTCATTGGAACCCCTCATTGGATGGCTCCGGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCTATTGAAATGGCTGAGGGTGGTCCTCCAAGATCATCAGTACATCCAATGAGGGTTTTATTCATGATATCAATCGAACCAGCTCCTATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTCCATGATTTTGTTGCAAAGTGCCTAACAAAAGAACCTCGTCTCCGCCCTACTGCTTCTGAGATGTTGAAGCACAAATTCTTTGAAAAGTGGAAAACTGGATCTGCTGCAATGTTGCCAAAACTAGAAAAGGCAAGGCAAATCAGGGCTTCAATGGCTTTGCAGGTGCAAACTCTTCCAGCTGCATCAGAAGATCAGGAGTTAGCTTCAAAACTAAATGACGAATATGGAGATACTGTTCCATCCAGACCTCATAACATCGGCATTGAGGGGGGTGCTGATCTCTCATCACATGGCGCTACAATGAAGCTACATAAAGTGGAAGATGTAGACACGAGTGAAGGCAACTTTGGCACTGTTATAATCCATGGGGATGAATTACATAAGACCACACAAGATGCAGATTCTGCAGTTTCTGTATCTGCTTTGACCAGTGGCACCGGAGACAGATTGGCTGACTCTGGGATTGAGAGTCAGAAAGTTGGTATTATGAACACTGCCTCTTTTAGAGGATCTAGTGCTACTACCAATACCATTCAATCGTCTTTACCTTATGTTAGTAATTCAACTGAGCAGAGCCTCAAAACCAAAGGGACTCATCGAGCACAAGCTGGAATTGGTGGTGATATAAGCAATAGCATGTTCAAGAATGAAACAGTCAGTCGTAAAGCATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCTGCTGGCAATACAGTACCCATCCCATTCTTAAGGGCAACAGATATATCACCTATTGCTCTCCTGTCAGACAATGTACTTGGTGGCATACATCAGGATACTGATGGAACTGGAACAGTGGAAGCATTGCAAGAGCTTTTTAGTGGCGATGGACAGTCCAAAAAGGGCCGGAGAGGACTAAATGAGCAGATGCCTCTTCCTCCAAGCATTTACCAAAGATTGACATCAAGTTCTACTCTAATGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTACGAAGATATGCCACTGCAGGAGCTGCAAGCAACCCAGGAGCAGCGAACTATTCAAAATCTCTCTGACACACTTCGAACCATTCTTCGGTTGTAG 1848 0.4334 MTGRHQSITTKVSTSSIPDSVTREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLASYQGEEYLWIVMEYCGGGSVADLMSVTEEPLDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGGPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFEKWKTGSAAMLPKLEKARQIRASMALQVQTLPAASEDQELASKLNDEYGDTVPSRPHNIGIEGGADLSSHGATMKLHKVEDVDTSEGNFGTVIIHGDELHKTTQDADSAVSVSALTSGTGDRLADSGIESQKVGIMNTASFRGSSATTNTIQSSLPYVSNSTEQSLKTKGTHRAQAGIGGDISNSMFKNETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGIHQDTDGTGTVEALQELFSGDGQSKKGRRGLNEQMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00919 615 FunFam Aurora kinase A 22 111 - -
Pumo8g00919 615 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Pumo8g00919 615 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 14 330 - -
Pumo8g00919 615 SUPERFAMILY Protein kinase-like (PK-like) 27 285 IPR011009 -
Pumo8g00919 615 MobiDBLite consensus disorder prediction 1 23 - -
Pumo8g00919 615 Gene3D Transferase(Phosphotransferase) domain 1 26 322 - -
Pumo8g00919 615 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00919 615 MobiDBLite consensus disorder prediction 1 26 - -
Pumo8g00919 615 FunFam serine/threonine-protein kinase dst1 isoform X1 27 319 - -
Pumo8g00919 615 ProSiteProfiles Protein kinase domain profile. 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00919 615 SMART serkin_6 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00919 615 CDD STKc_MAP4K3_like 29 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00919 Pumo-Chr8 34532809 34543396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00919 38 615 MAP Kinase Kinase Kinase Kinase AT1G69220 69.477 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Pumo8g00919 Pkinase 4.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00919 - - gmx:100804995 1170.61