LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo8g00900	ATGTTGACAGTGTTTTATTATGCCCTGGCTTTGATGTTGTGTGCATTCTTTGCAGTGCTGAAATGGAACAACATAAGGTACTCAAGGAAAGGAATGCCTCCGGGGTCATTGGGTTGGCCTTTTGTTGGGGAGAGTGTCAAATTTCTCACACAAGGACCAGATTTCATGAAAGGAAGCAGATCAAGACATGGAAATCTCTTCAAAACTCACGCATTAGGGTCCCCTATTGTTGTTAGCATGGATCCTGATGTGAATAGATACATACTCTTGAATGAAGCAAAGGGCTTAGTTCCTGGCTACCCTGACTCCATGAGGAAGATACTAGGGACTAACATTGCTGAAGTTCATGGTGCCATGCATAAACGAATTAGAGGGTCACTATTATCTCTCATTGGTCCAATTGCAGTCAAGGATCGTCTTTTGCCAGAAGTTGATGAGTTCATGAGGTCTTACCTTGACAATTGGGCTGGTAAAATGATTGATCTTCAAGAAAAAACTGTAGAGATGGCATTCTTTATTTCCATGAAAGCTGTGGTAGAAAATGAGCCAAAGTCTTTCATCGAGTCCTTTAAAGCCACATTTGACAACATGGCATTAGGAACAATATCCTTGCCAATTAAAATTCCAGGAACCCAATATTATCGAGGACTCAAGGCTAGGGAAAAAGTGGTGACAATGCTAAGAGAGCTCATAGCCAAGAGAAGAGCTTCTTCTACTACTTATGATGACATTCTTGATAACCTTATGAGAAATGAGGATGGCAAACACAAACTAGATGATGAAGAAATAATTGAGCAAATCATCACAATCTTGTATTCGGGTTATGAAACAGTATCAACTACTACAATGATGGCTATCAAATACCTATGTGATAACCCAAGTGTTCTTCAGGCAGTAAGGGATGAGCATTTTGCAATCCAACAAAAGAAAATGCCTGGGGAACGGATCAACTGGGATGACTACAAGAATATGAGCCTAACTCGTGCGGTGATACTTGAAACCATGAGATTGGCTAGTGTTGTTGCTGGAGTGATGAGGAGGACCACTAATGATATAGAATTGAATGGTTTTATCATTCCCAAGGGATGGAGAGTTTATGTTTACACAAGGGAGACTAACTTTGATCCCTTCCTCTATGAAGAACCTTTTGCTTTTAATCCATGGAGATGGCTGGAGAAAGGCTTGGAGTCTCATAATCACAACATGCTGTTTGGAGCAGGAGGCAGGGTGTGTCCTGGAAAGGAATGGGGCATGCTTAAAATTACCCTTTTCATTCACTACTTTGTGACTAGATACAGGTGGGAAGAAGCAGAGGGAAACAATCAACTTATGAAATTCCCGAGAGTGTTGGCACCAGAAGGACTACACATAAGGATCGCAGAGTACTAG	1389	0.4132	MLTVFYYALALMLCAFFAVLKWNNIRYSRKGMPPGSLGWPFVGESVKFLTQGPDFMKGSRSRHGNLFKTHALGSPIVVSMDPDVNRYILLNEAKGLVPGYPDSMRKILGTNIAEVHGAMHKRIRGSLLSLIGPIAVKDRLLPEVDEFMRSYLDNWAGKMIDLQEKTVEMAFFISMKAVVENEPKSFIESFKATFDNMALGTISLPIKIPGTQYYRGLKAREKVVTMLRELIAKRRASSTTYDDILDNLMRNEDGKHKLDDEEIIEQIITILYSGYETVSTTTMMAIKYLCDNPSVLQAVRDEHFAIQQKKMPGERINWDDYKNMSLTRAVILETMRLASVVAGVMRRTTNDIELNGFIIPKGWRVYVYTRETNFDPFLYEEPFAFNPWRWLEKGLESHNHNMLFGAGGRVCPGKEWGMLKITLFIHYFVTRYRWEEAEGNNQLMKFPRVLAPEGLHIRIAEY	462

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo8g00900	462	PANTHER	CYTOCHROME P450 26	30	438	-	-
	Pumo8g00900	462	CDD	CYP90-like	60	459	-	-
	Pumo8g00900	462	PRINTS	P450 superfamily signature	402	411	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo8g00900	462	PRINTS	P450 superfamily signature	329	340	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo8g00900	462	PRINTS	P450 superfamily signature	273	290	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo8g00900	462	PRINTS	P450 superfamily signature	411	422	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo8g00900	462	Pfam	Cytochrome P450	33	451	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo8g00900	462	PRINTS	E-class P450 group IV signature	373	391	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo8g00900	462	PRINTS	E-class P450 group IV signature	54	77	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pumo8g00900	462	PRINTS	E-class P450 group IV signature	411	429	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo8g00900	Pumo-Chr8	34234090	34238541	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo8g00900	80	462	Cytochrome P450	AT5G38970	56.104	1.53e-160	457

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo8g00900	K09590		-	gmx:100818004	872.463

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