Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00888 ATGAAGGAATCCCACATAGTAGAGTCAAGTAGGTATGCCTTTAGCTTTGTACTTCACCCCTTTTTCTTATTGTTGCTATTCTTCCATTTAACCCATTGTGATTCAATTAATGTCCCAGATAAAATCCTCCTAAACTGTGGTTCTAATAAAGCATCACCATTCAATGGAGAAAATTGGATAGGAGATGTTGGATCTAATTTCTTGCCTCCGGAGTATGACAAGAGTTCATCTATACTCTTGATCTCAAACATAGAGTCTCTAGCGCCAAAAGTTCCATACTCAACAGCAAGAATAACTCATTCTCCATTGACCTACTCATTCCCTTCCACCCCTGGCCTTAAATTCATTCGTATTTACTTTCTCTCATCTTCATATCTGATGTTGAACCCCACCAAGGCGTATTTCTCTGTAAAAGCTGGTCCTTACACTCTTGTAAGTAACTTTAATCCATCTGTTTTTGAAGAAGAGCTCAACTTGGTGTATTTCACCAAGGATTTCTTAGTCAATGTTAGGGAAGAGAAAGTAAACATTACATTTACTCCATCTCCTTTAATTCCCGATGCATTTGCCTTTGTAAATGGCATTGAGATATTCCCAGTGCCCCTTAGTATATACTTTCCCAGTTCCAAGGTTCCTTACCTTGGGCACCAGGAACCTTTATTTATTAATGATGAATATGCTCTAGAGATGCTTTACCGGGTTAGCATGGCTAATTCTGATGTTGAAAATGCATTTGGAACATGGTTGGGTGATTCTAGTTACATATCTGGTTCACTATCTGGAAGTGTCCTTAGTATAAAGCACCGTACGGTTAGCATGAATTACACCACTTTGACTTCAAAGGATTACAATTATTCAGCACCAGAAGAGCTATATAGGACTGCCAGGACAATGGGTAGCCATGGAGATGCTAACATGAAGTACAATTTAACATGGTCTTTCCCTGTTGATTCGGGATTCAAATACCTTGTTAGGCTTCATTTCTGTGAGATCTCTATGGTGGTAATGCAGGTCCGTCAAAAGGTGTTCAAGGTGTACATAAACAACCAAACAGCAGAGGAGAGGATGGACGTAGTTGCTTTGGCTGGTGGACCACTTACTCCATTACACAGGGACTATGTTGTTATGGTTCCCACAGAGAGTGGAAGAAGGAAAAATATGTGGATCTCACTTCACCCTAACTTGGACTCAAAACCAAAATATGCTGATGCTATATTGAATGGCATTGAGATCCTCAAGTTAAGTGATAACAATCATAGTCTTGCCGCAATATTCCAATTGAGAAGGGAACAAAGGAAGAAGAAAGTTCCACATATCACTATTGTGGCTGGTGCTACTTTAGGTACCATTTTGGGTCTGTTTACATTTTTCATTCTTATCCGCAGAGCATGGAAAAAACTGAAATGGGGAACTACAAATTATACTACAAGAAGTCACAAAAACATTCAATTAACGGTGACCTCAAGTCATTGCCATCAATTCACATTAGCAGAGATCAGCATAGCCACCAGCAACTTCAGTGAAGCTCTTGTTATTGGGGAGGGAGGCTTTGGAAAGGTGTACAAAGGCATCATGCATCATGATGGAACTCCTGTGGCAGTAAAGCGCTGTAATCCAAGTTCTCGCCAAGGATTTAAGGAGTTTCAAAATGAGATCAGCTTTTTCTCATTTTGTCACGTGAATTTAGTGTCACTGCTGGGATACTCCCAAGAGGGAAATGAACTGATACTTGTCTATGAATTCATGGCTCAAGGCACTCTGAGTGACCATTTGTACAAGAAACAAAAACAGCCACTGCCTTGGATTCAGAGACTAAAGATTTGTGTTGGTGCAGCTCGAGGACTACATTACCTCCACACTGGCACAAGCCACCCAGTGATACACCGTGATGTGAAGTCAGCCAACATTTTATTGGATCAAAATTGGGTAGCTAAGATTGCAGATTTTGGGTTGTGTAGAACAGTTCCATCACTTTACCACTCACATGTTAGCACTGAGGTTAAAGGTACTTTAGGATATTTAGACCCTGAGTACTATAAGAGAAGAAAACTGACTGAAAAATCTGATGTGTATTCATTTGGAGTGGTTTTGTTTGAAGTGTTGTGTGGAAGACCAGCTGTGAATCCTGTGGCAGTGGAAGAGGAAAGTGAGAAAGCTGGGTTGGCCACGTGGGCCATGCACTGTTACCAGTGTGGAACCATTGATCAATTAGTTGATCCATATTTAGAAGGGAATATTAGGCTAGAATGCCTGAGGGCGTTTGTGGATATAGGCATCCAGTGTTTGGCTGATAGAAGTGCAGATAGGCCAACTATGGGGGAGGTGCTTAGTACTTTGGAGAAGATCCTTTCCTTGCAGGATAGTTTAGAGGAACAAGAAATTAATACAATTTAA 2394 0.4064 MKESHIVESSRYAFSFVLHPFFLLLLFFHLTHCDSINVPDKILLNCGSNKASPFNGENWIGDVGSNFLPPEYDKSSSILLISNIESLAPKVPYSTARITHSPLTYSFPSTPGLKFIRIYFLSSSYLMLNPTKAYFSVKAGPYTLVSNFNPSVFEEELNLVYFTKDFLVNVREEKVNITFTPSPLIPDAFAFVNGIEIFPVPLSIYFPSSKVPYLGHQEPLFINDEYALEMLYRVSMANSDVENAFGTWLGDSSYISGSLSGSVLSIKHRTVSMNYTTLTSKDYNYSAPEELYRTARTMGSHGDANMKYNLTWSFPVDSGFKYLVRLHFCEISMVVMQVRQKVFKVYINNQTAEERMDVVALAGGPLTPLHRDYVVMVPTESGRRKNMWISLHPNLDSKPKYADAILNGIEILKLSDNNHSLAAIFQLRREQRKKKVPHITIVAGATLGTILGLFTFFILIRRAWKKLKWGTTNYTTRSHKNIQLTVTSSHCHQFTLAEISIATSNFSEALVIGEGGFGKVYKGIMHHDGTPVAVKRCNPSSRQGFKEFQNEISFFSFCHVNLVSLLGYSQEGNELILVYEFMAQGTLSDHLYKKQKQPLPWIQRLKICVGAARGLHYLHTGTSHPVIHRDVKSANILLDQNWVAKIADFGLCRTVPSLYHSHVSTEVKGTLGYLDPEYYKRRKLTEKSDVYSFGVVLFEVLCGRPAVNPVAVEEESEKAGLATWAMHCYQCGTIDQLVDPYLEGNIRLECLRAFVDIGIQCLADRSADRPTMGEVLSTLEKILSLQDSLEEQEINTI 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00888 797 Pfam Malectin-like domain 44 413 IPR024788 -
Pumo8g00888 797 Pfam Protein tyrosine and serine/threonine kinase 511 778 IPR001245 GO:0004672|GO:0006468
Pumo8g00888 797 ProSiteProfiles Protein kinase domain profile. 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00888 797 PANTHER OS03G0124300 PROTEIN-RELATED 16 468 IPR046957 GO:0004672
Pumo8g00888 797 ProSitePatterns Protein kinases ATP-binding region signature. 512 535 IPR017441 GO:0005524
Pumo8g00888 797 CDD STKc_IRAK 512 782 - -
Pumo8g00888 797 FunFam Receptor-like protein kinase FERONIA 582 796 - -
Pumo8g00888 797 FunFam FERONIA receptor-like kinase 41 201 - -
Pumo8g00888 797 FunFam FERONIA receptor-like kinase 226 415 - -
Pumo8g00888 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Pumo8g00888 797 Gene3D - 42 200 - -
Pumo8g00888 797 Gene3D - 226 415 - -
Pumo8g00888 797 SMART serkin_6 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g00888 797 FunFam receptor-like protein kinase FERONIA 470 581 - -
Pumo8g00888 797 Gene3D Transferase(Phosphotransferase) domain 1 582 796 - -
Pumo8g00888 797 Gene3D Phosphorylase Kinase; domain 1 468 581 - -
Pumo8g00888 797 SUPERFAMILY Protein kinase-like (PK-like) 475 779 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00888 Pumo-Chr8 33976343 33978736 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00888 40 792 Receptor kinase-like Gene Family AT3G51550 44.095 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo8g00888 Malectin_like 4e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00888 - - gmx:100776324 1332.01