Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00847 ATGAGCAAAACCAGTTGTTGGGTTCTTCTACCCTTTCTTATTCTTTCTACTTTTGTTGCTGAAATTCGTGGGGACAGACAAGGTCGAGCTGTTGACAAATTGCACAGGTCAATGTTAAAAGCAAATTCCCAATTGGATGATAGGAGTAGTCACTTTGAGGCACAAGATCTTATTGTGAATGATGATGTGGTGGTTCATTCTCAATTAGGTCTGAAAGAGAAAGACAGGATTAAGAAGCTGCCAGGGCAACCCCAAGTGAAGTTCTCTCAATATGGAGGGTATGTCACGGTGGATAAAGTGGCAGGGCGTGCCTTTTATTATTACTTTGTGGAAGCTCAACGTTCTAAAGAAACATTGCCTCTTGTTCTTTGGCTCAACGGAGGAATTGGTTGGAGAGATTTCCTGAGTACAAGAATAGATATTTCTACATTACTGGGGAGGGAGAGCTATGCTGGCCATTTTGTCCCTCAACTTGCACACAACATTCTCTATCATAACAAAAAGGCTAAAAAGACAATCATCAACCTCAAAGGAATAATGATTGGGAATGCAGTGATCAATCATGAAACAGATGAACCAGGAACATATGATTTTTTTGCTAGCCATGCAATAATCTCTGATGAAACAGCAAATGATGTCAAGAAATTTAGTGATTTCTCACATCACAATCAAACTAGTAAGTGCAATACAGCAATAGAGAAAGTTGTTGGTAGTGATGCTCCTTTCATTGATTGGTACAACATCTATGCTCCACTGTGCCATAATACCAATCTCACTACGTTGCCAAAGAAGAACTCAGTTGAATTTAACCCCTGTACTGAAAATTATTTGCTTGCATACCTTAACCGGGGTGATGTTCAGGAAGCCTTAGATGCCAATGTCACTAAACTCAAATACGGTTGGGAGGTCTGCACTGAGGTCATTTCAAAGTGGGAGGATAGCCCTTCAACAATTATTCCCCTTTTACATGAATTCCTTAATAAAGGACTTAGGGTTTGGATTTATAGTGGTGATATAGATGTAGTGGTATCTGTTACATCAACTAAGTATATCATTAAGAAGATGAAGCTTCCAATTGAGACTGTTTGGCATCCTTGGTTCATATTTGGAGAGGTTGGTGGCTATACTCAAGTATACAAGGGAGGTTTAACTTTTGCCACGGTGAGGGAAGCAGGGCATCAAGTACCAAGCTACCAGCCAGGAAGAGCATTTTCTCTAGTTAAACATTTTTTAGATGGCACTCCTCTCCCTAATACAAAACATAACTAA 1269 0.398 MSKTSCWVLLPFLILSTFVAEIRGDRQGRAVDKLHRSMLKANSQLDDRSSHFEAQDLIVNDDVVVHSQLGLKEKDRIKKLPGQPQVKFSQYGGYVTVDKVAGRAFYYYFVEAQRSKETLPLVLWLNGGIGWRDFLSTRIDISTLLGRESYAGHFVPQLAHNILYHNKKAKKTIINLKGIMIGNAVINHETDEPGTYDFFASHAIISDETANDVKKFSDFSHHNQTSKCNTAIEKVVGSDAPFIDWYNIYAPLCHNTNLTTLPKKNSVEFNPCTENYLLAYLNRGDVQEALDANVTKLKYGWEVCTEVISKWEDSPSTIIPLLHEFLNKGLRVWIYSGDIDVVVSVTSTKYIIKKMKLPIETVWHPWFIFGEVGGYTQVYKGGLTFATVREAGHQVPSYQPGRAFSLVKHFLDGTPLPNTKHN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00847 422 FunFam Carboxypeptidase 318 413 - -
Pumo8g00847 422 Gene3D - 318 413 - -
Pumo8g00847 422 Pfam Serine carboxypeptidase 81 128 IPR001563 GO:0004185|GO:0006508
Pumo8g00847 422 Pfam Serine carboxypeptidase 147 413 IPR001563 GO:0004185|GO:0006508
Pumo8g00847 422 SUPERFAMILY alpha/beta-Hydrolases 77 417 IPR029058 -
Pumo8g00847 422 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 76 131 IPR001563 GO:0004185|GO:0006508
Pumo8g00847 422 Gene3D - 272 309 - -
Pumo8g00847 422 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 107 IPR001563 GO:0004185|GO:0006508
Pumo8g00847 422 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 156 IPR001563 GO:0004185|GO:0006508
Pumo8g00847 422 PRINTS Carboxypeptidase C serine protease (S10) family signature 383 396 IPR001563 GO:0004185|GO:0006508
Pumo8g00847 422 Gene3D alpha/beta hydrolase 135 255 IPR029058 -
Pumo8g00847 422 Gene3D alpha/beta hydrolase 71 134 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00847 Pumo-Chr8 32799380 32803730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00847 280 416 Calmodulin-binding Proteins AT2G22960 33.333 1.11e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00847 K16297 - gmx:100804815 382.104