Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00839 ATGGTCCCCAGTGAGATCAGAGGAGTCCACTATCTAGCACCAGAAAATCCATTCCTAGTTCCACCAAACTTTGGCCTTCTGCAAAGTGACATCCCAAACCTCCATCTCAACACCCTCCTAAGCACCTTTCCAAACTGCCACTTCCCTCCTTCAGGCCATGAATTTGTTGTTCCTCCCTCCTCATGTCTCAGCAGCAATTCAACCTCTGATGAAGCTGATGAAATCCAGTTCAACATCATCGACGAAAGGAAGCACCGGAGAATGATATCCAACCGAGAATCCGCCCGCCGATCAAGGATGAGGAAGCAAAAGCACCTGGATGAGCTGTGGTCTCAGGTTGTCAGGCTCAGAACTGAGAACCACAGCCTTATTGACAAACTCAACCATGTCTCTGAGTCCCATGACAGAGTCCTCCAAGAGAATGCACGCCTCAAGGAAGAAGCTTCCGATCTTCGCCAAATGCTAGCAGACATGCAAATTGGAACCTCTTTTGCTTGCACCATGGAAGATTTGGAGGATCTTCCATGCAACACTTCTCAATTCAAACCTGATCCCTCAAACCAATCAATCACTCCTGCAGACATGATTCATGAATGA 597 0.4774 MVPSEIRGVHYLAPENPFLVPPNFGLLQSDIPNLHLNTLLSTFPNCHFPPSGHEFVVPPSSCLSSNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHSLIDKLNHVSESHDRVLQENARLKEEASDLRQMLADMQIGTSFACTMEDLEDLPCNTSQFKPDPSNQSITPADMIHE 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00839 198 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Pumo8g00839 198 Gene3D - 81 136 - -
Pumo8g00839 198 SUPERFAMILY Leucine zipper domain 83 133 IPR046347 GO:0003700|GO:0006355
Pumo8g00839 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Pumo8g00839 198 Pfam bZIP transcription factor 83 141 IPR004827 GO:0003700|GO:0006355
Pumo8g00839 198 Coils Coil 127 161 - -
Pumo8g00839 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Pumo8g00839 198 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 166 IPR044521 -
Pumo8g00839 198 MobiDBLite consensus disorder prediction 179 198 - -
Pumo8g00839 198 MobiDBLite consensus disorder prediction 177 198 - -
Pumo8g00839 198 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Pumo8g00839 198 FunFam BZIP transcription factor 81 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00839 Pumo-Chr8 32580885 32581774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00839 28 171 bZIP Transcription Factor Family AT3G30530 56.024 1.55e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo8g00839 bZIP_1 2.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00839 - - gmx:778126 381.333