Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00836 ATGCTCTTACGTGGAACAATATCCACCCCTCTCCCACCCTCCCTGCGCCTCCGCGTGGCACCGGCGCGAATCCGCCACCGAACCGTCGCCGTCGCCGTCGCGTCATCCTCCTCCTCCGGCGGCGGCGGTGATTATCCGCTGTCGGTCTCCGACGCGGCGCTGGAGTCGCGCGGGTTCGCGCTGCGTCGCGGCGCGGAGGGGCTGGACCTGGAGGAGCTGAACTCCGTGTTCGCGGCGGTGGGGTTCCCGCGGCGGGACCCGGAGAAGATCCGCGTGGCGCTGGAGCACACGGAGGCGGTGCTGTGGGTGGAGCACCGGAAGACGCGGCGGCCGGTGGCGTTCGCGAGGGCCACCGGCGACGGCGTCTTCAACGCCATCATATGGGACGTGGTGGTGGACCCCTCCTTCCAGGGGATTGGGCTCGGGAAGGCCGTCATCGAGAGGCTGCTCCAGGAGCTTCTCGGAAAGGGAATTTCCAATATTGCCCTCTATTCGGAGCCCCGCGTTCTCGGGTTTTATCGTCCTTTGGGCTTCGTTGCTGACCCGGATGGGATCCGGGGAATGGTGTACTCTAGGAAACAAAAGAAAAAAATAGGATAA 600 0.6517 MLLRGTISTPLPPSLRLRVAPARIRHRTVAVAVASSSSSGGGGDYPLSVSDAALESRGFALRRGAEGLDLEELNSVFAAVGFPRRDPEKIRVALEHTEAVLWVEHRKTRRPVAFARATGDGVFNAIIWDVVVDPSFQGIGLGKAVIERLLQELLGKGISNIALYSEPRVLGFYRPLGFVADPDGIRGMVYSRKQKKKIG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00836 199 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 59 196 IPR000182 GO:0016747
Pumo8g00836 199 CDD NAT_SF 110 164 - -
Pumo8g00836 199 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 69 182 IPR016181 -
Pumo8g00836 199 Gene3D - 64 192 - -
Pumo8g00836 199 FunFam Putative acetyltransferase NSI 64 191 - -
Pumo8g00836 199 PANTHER ACYL-COA N-ACYLTRANSFERASE 47 195 IPR045039 GO:0008080
Pumo8g00836 199 Pfam Acetyltransferase (GNAT) family 84 178 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00836 Pumo-Chr8 32548977 32549927 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pumo8g00836 Acetyltransf_1 2.8e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00836 K22450 - gmx:100778613 335.88