Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00823 ATGGCAAAAGATTCTTCCGATACTGATTCCCATCACAAACGTCTTGGTCTTTTAAAAGATCAAGTTCACTTGGTTAAAAGGAAAGACTCTGATCGCTATGAGGTTGCTCCAATCCAAGACCAACTATCATTTGAGAAGGGTTTCTTTATAGTAATTCGTGCATGCCAATTGTTATCCCAAAAGAACAATGGAATAATACTGGTAGGGGTGGCAGGTCCTTCAGGGGCGGGGAAGACTGTATTTACTGAAAAGATACTCAACTTCATGCCCAGCATTGCAGTCATTTCAATGGATAATTACAATGACGCCAGTCGAATTGTTGATGGGAATTTTGATGATCCACGCTTAACAGACTATGACACATTACTCCAGAATCTACATGATTTAAAGGAAGGAAAGCCAGTTGAAGTTCCCATATATGATTTCAAGTCCAGTTCACGTACAGGATACAGGACAGTAGAAGCCCCGAGTTCTCGTATTGTGATTATAGAGGGCATCTATGCCTTGAGTGAGAAGTTGCGACCTCTACTGGACCTTCGAGTCTCTGTTACGGGAGGAGTTCACCTTGACCTTGTAAAACGAGTTATACGTGATATACAACGTGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCGGAGACGGTGTATCCAATGTACAAGGCATTTATTGAGCCAGATCTCCAGACAGCACATATAAAAATCATCAACAAATTCAATCCATTTACTGGATTCCAGAGCCCTACTTACATATTAAAGTCAGGAAGGAATGTAGCAGTTGATCAAATTAAAGCTGTTCTCTCTGAGGATTTTAAGGAAACAACAGAGCAGACTTATGACATATATCTTCTACCACCCGGTGAAGATCCAGAAACTTGCCAATCATATTTACGGATGCGAAATAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATAATCCATTCGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTAATGGCTTTGGGATACACAATAGCCACTATCCTTAAGAGAAACAGCCATGTCTTTTCTGATGATAGGGTTTGTGTGAAACTAGATTGGCTTGAGCAACTTAATAGACATTATGTTCAGGTACAAGGAAGAGATCGTTTAGTTTTAAAATACATAGGAGAGCAGCTGGGTCTAGAAGGTTCCTACATTCCTCGTACCTATATTGAGCAAATTCAAATTGAAAAGCTTGTGGATGAGGTTATGGCCCTACCAGAGGATTTGAAGACAAAGCTCAGCCTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTATCTAGAGCTTCTGCCGACAGAGTTGCCATGAGAAATAAACATCTGAGGAGTGGAATATCACAGTCGTATACCAATCAAAGGGACAAAAATCTAGCTAAGGTTACTGGATATGGTGCCAACAATAGAAGGTATGGAGAAAGAAATTCAGACTCCACCGCAATGCCAGTAAATCAGGGAGCCATCAATCAGCTTTCAGACCAAATTTCTGCCCTCAATGATAGAATGGATGAGTTTACAAATCGCATCGAAGAGCTGAATTCCAAGTTAACCATCAAGAAAAATTCTCCAAGCCAACAAAATATGTCACTTCAAACCGAGACATGCAATGGATCTGCTCCCACCTCTCACTTCATCACTAGTTTGGGCAATGGTTCCCTTACTGGATCTAAAATGACAAATTCCTCTTCGTCGTCGCAGTTAGCTAAAGATTCTCCTTTAATGGATGAGATATTGAGCATCGCACGCAGTCAGCGTCAGATCATGCATCAATTGGACAATCTCAATAACCTTCTCAGGGGGAGCTTGGGGGAGAAGTCTCACCAAACAAGAACCAACATGAAAAGCGTTGACTTGCCATCAGATTCCATGGGGGCTCGTGTTATGGCGGTGGTGGCAGTTGGTTGTGTGGGGATCTTCTTGATGAAGGGTCTGTTGAACAAAAAGTGA 1992 0.4172 MAKDSSDTDSHHKRLGLLKDQVHLVKRKDSDRYEVAPIQDQLSFEKGFFIVIRACQLLSQKNNGIILVGVAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYDTLLQNLHDLKEGKPVEVPIYDFKSSSRTGYRTVEAPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSGRNVAVDQIKAVLSEDFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYVQVQGRDRLVLKYIGEQLGLEGSYIPRTYIEQIQIEKLVDEVMALPEDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKHLRSGISQSYTNQRDKNLAKVTGYGANNRRYGERNSDSTAMPVNQGAINQLSDQISALNDRMDEFTNRIEELNSKLTIKKNSPSQQNMSLQTETCNGSAPTSHFITSLGNGSLTGSKMTNSSSSSQLAKDSPLMDEILSIARSQRQIMHQLDNLNNLLRGSLGEKSHQTRTNMKSVDLPSDSMGARVMAVVAVGCVGIFLMKGLLNKK 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00823 663 Gene3D - 257 412 - -
Pumo8g00823 663 MobiDBLite consensus disorder prediction 536 557 - -
Pumo8g00823 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 236 IPR027417 -
Pumo8g00823 663 SUPERFAMILY CYTH-like phosphatases 266 407 IPR033469 -
Pumo8g00823 663 PANTHER URIDINE KINASE 17 423 - -
Pumo8g00823 663 Gene3D - 66 247 IPR027417 -
Pumo8g00823 663 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Pumo8g00823 663 PRINTS Uridine kinase signature 65 82 - -
Pumo8g00823 663 PRINTS Uridine kinase signature 132 147 - -
Pumo8g00823 663 PRINTS Uridine kinase signature 188 198 - -
Pumo8g00823 663 PRINTS Uridine kinase signature 224 237 - -
Pumo8g00823 663 FunFam Phosphoribulokinase / Uridine kinase family 66 246 - -
Pumo8g00823 663 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Pumo8g00823 663 Coils Coil 503 537 - -
Pumo8g00823 663 CDD UMPK_like 67 239 - -
Pumo8g00823 663 Pfam CYTH domain 270 404 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00823 Pumo-Chr8 32095149 32142566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00823 66 365 PRT Gene Family AT5G40870 24.920 1.13e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00823 K00876 - gmx:100781286 1218.37