Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00772 ATGTACTATGAAGATGCAGACAAACCAGCCCATGCCCTTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACAATACTTTCAGATAAAACTGGAACTCTGACCTGCAACTCGATGGAGTTCATCGAATGTTCCATTGCTGGGGTAGTTTATGGCCGTGGTGTTACAGAGGTTGAGAGGGCAATGAATAGAAAAAATGGTTCTCGTTTGATTGATGACACAAGGGACTCTCCTGTCAGAAATGCTCCCATCAAAGGATTCAACTTTTCAGATGAAAGGATAATGAATGGAAAATGGGTTAATGAGCCTTATGCTAATGTTATCCAGAATTTTTTTCGCTTATTGGCAATCTGCCATGCAGCCATACCAGAAGTTGATGAAGACACTGGAAATGTCTCATATGAAACTGAATCTCCAGATGAAGCAGCATTTGTGATTGCAGCGAGAGAAATTGGTTTTGAATTCTATAAAAGGACTCGGACTAGTTTATCAATGCATGAAATGGATCCAGTTTCTGGTGACAAAATTGAAAGGATGTACAAACTTCTTAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGAAAGATGAAGAAGGGAGAATTTTCCTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGGATGGGAGGGAGTTTGAAGAGAAAACCTTGGAACATGTGCATGAATATGCTGATGCAGGTCTAAGGACCTTGATCCTGGCATATCGTGAACTTGATGAAAACCAATACAAGGAGTTTGACAATAAATTTTCTCAAGCGAAGAATTCAATTAGCGAAGATCGGGAAACACTGATTGAGGAAGTATCAGATAAGATTGAGAGGAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATAGGGTTCCTGATTGCATTGACAAGCTTGTCCAAGCTGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCTATCAATATTGGATTATCATTCATTTGGAAACCCCAGAAATTAAAGCATTTGGAGAAGGCTGGAGACAAGGGTGCTATTGTCAAGGCTTCAAGAGAAAATATCCACCATCAAATATCTGAAGCTGCTCAACAGCTTACTGCCTCCAGAGGAACCTCTCAGCAAGCATTTGCTCTAATTATTGATGGAAAATCACTTACTTATGCTCTAGAGGATAATATGAAGAACATGTTTCTAGACCTTGCAATTCGTTGTGCATCTGTTATCTGCTGCCCTATTGGTGATGGAGCTAACGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATTAGTGGTGTTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCTATTGCACAGTTCCGTTATTTGGAAAGATTACTTCTTGTACATGGACATTGGTGTTACCGAAGGATCTCATCAATGATATGCTATTTCTTCTACAACAACATCACATTTGGCTTTACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGGCAACCTGCATACAATGACTGGTTTTTGTCACTCTATAATGTCTTCTTTTCGTCACTTCCCGTGATTGCTCTTGGGGTCTTTGACCAGGATGTGTCTGCTCGGTACTGTCTGAGGTTTCCTATGTTATATCAAGAAGGCGTGCAAAATCTCCTCTTTAGCTGGCGTCGAATTTTCAGCTGGATGCTTGATGGCTTTATTGGTGCCATAATAATTTTCTTCTTCTACACAAAGGCAATGGAGATTCAAGCCTTTGATGAGAAGGGAAGAACTGCTGGTAGGGATATACTTGGAGCAACGATGTATACTTGTGTGGTTTGGGTTGTGAACTTGCAAATGGCTGTTGCTATAAATTACTTCACCTTGATTCAACATATTTTCATCTGGGGCTCCATTGCTATATGGTACCTTTTCCTCCTGGCATATGGAGCATTGTCTCCCAGCATTTCCGGAAATGCTTACAAAGTCTTCATTGAAACTCTAGCACCATCTCCTTCCTTTTGGATTGTGACGTTGTTTGTTGCGATCACAACACTTATCCCATACTTCTCTTACTCGGCAATACAGATGAGGTTCTTTCCCATGTTTCATGAAATGGTACAATGGATAAGGTACGAGGGAAAGACAAATGATCCTGAATTCGTCGCTATGGTGCGGCAAGTATCATTGCGGCCAACAACTGTCGGTTCAACAGCTCGCTTAGCCGCTAAGGATAATGACTTTAGAGACAGTGACACTAACCATAGATAG 2280 0.4101 MYYEDADKPAHALTSNLNEELGQVDTILSDKTGTLTCNSMEFIECSIAGVVYGRGVTEVERAMNRKNGSRLIDDTRDSPVRNAPIKGFNFSDERIMNGKWVNEPYANVIQNFFRLLAICHAAIPEVDEDTGNVSYETESPDEAAFVIAAREIGFEFYKRTRTSLSMHEMDPVSGDKIERMYKLLNVLEFNSSRKRMSVIVKDEEGRIFLLCKGADSVMFERLAKDGREFEEKTLEHVHEYADAGLRTLILAYRELDENQYKEFDNKFSQAKNSISEDRETLIEEVSDKIERNLILLGATAVEDKLQNRVPDCIDKLVQAGIKIWVLTGDKMETAINIGLSFIWKPQKLKHLEKAGDKGAIVKASRENIHHQISEAAQQLTASRGTSQQAFALIIDGKSLTYALEDNMKNMFLDLAIRCASVICCPIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYNNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLRFPMLYQEGVQNLLFSWRRIFSWMLDGFIGAIIIFFFYTKAMEIQAFDEKGRTAGRDILGATMYTCVVWVVNLQMAVAINYFTLIQHIFIWGSIAIWYLFLLAYGALSPSISGNAYKVFIETLAPSPSFWIVTLFVAITTLIPYFSYSAIQMRFFPMFHEMVQWIRYEGKTNDPEFVAMVRQVSLRPTTVGSTARLAAKDNDFRDSDTNHR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00772 759 Gene3D - 71 299 IPR023299 GO:0000166
Pumo8g00772 759 SFLD Haloacid Dehalogenase 12 477 - -
Pumo8g00772 759 NCBIfam HAD-IC family P-type ATPase 420 508 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo8g00772 759 Pfam Cation transport ATPase (P-type) 128 222 - -
Pumo8g00772 759 FunFam Phospholipid-transporting ATPase 138 296 - -
Pumo8g00772 759 SUPERFAMILY HAD-like 16 470 IPR036412 -
Pumo8g00772 759 SFLD p-type atpase 12 477 IPR044492 -
Pumo8g00772 759 NCBIfam phospholipid-translocating P-type ATPase 1 424 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pumo8g00772 759 Pfam Phospholipid-translocating P-type ATPase C-terminal 454 704 IPR032630 -
Pumo8g00772 759 ProSitePatterns E1-E2 ATPases phosphorylation site. 30 36 IPR018303 -
Pumo8g00772 759 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 35 298 IPR023299 GO:0000166
Pumo8g00772 759 Gene3D - 300 474 IPR023214 -
Pumo8g00772 759 SUPERFAMILY Calcium ATPase, transmembrane domain M 8 704 IPR023298 -
Pumo8g00772 759 PRINTS P-type cation-transporting ATPase superfamily signature 426 445 - -
Pumo8g00772 759 PRINTS P-type cation-transporting ATPase superfamily signature 28 42 - -
Pumo8g00772 759 PRINTS P-type cation-transporting ATPase superfamily signature 319 329 - -
Pumo8g00772 759 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00772 Pumo-Chr8 30318871 30324139 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00772 1 746 Primary Pumps ATPases AT3G25610 69.260 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00772 K01530 - gmx:100785037 1389.79