Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00763 ATGATGCCCCCTCAGCAAGAAACCTCTATTACATCATCAAACATTCCGGCCATCCCCAACCGCCCGGAAAACCGCTCCGTCCACGCCGAACCGCCGAGCTCCGCCACCAATATTGACACTAAACCCACTTTCATGAGCAATGACATTCACAACAATGATTCTCATCAGCACCACCCAGCTCCTTCACCAGCCAGATTTTCTGTTCTTCACCAATCCTTGCGCCCCGTCACCCTCAAATTTGAGGATGTTTCCTACAGCATAACCTTTGGAAGGGACAAGAGTGGTTGTGTATCTTCTCAAAAGCCAAAGCACACAAGGACAGTGCTGAATGGTGTGACCGGTATGGTGGGGCCCGGGGAGGTGATGGCAATGTTGGGTCCCTCAGGGAGCGGCAAGACCACCTTACTCACCGCCCTCGCCGACCGGCTTGCCGGAAAACTCTCCGGCGCCATCACATACAACGACCACCCTTTCTCCAGCTCCATGAGGCGCAGGATAGGGTTTGTGTCCCAAGATGACGTGTTGTACCCTCACCTCACCGTGCTTGAGACTCTAACCTATGCTGCCATGTTGAAACTTCCCAAGAGTTTGACTAGGGAAGAGAAAATGGAGCAAGCTGAAATGATCATTGTGGAATTAGGGCTGTCCCGGTGCCGGAACAGCCCTATTGGGGGTGGGGCCGCCTTGTTCCGGGGGATTTCTGGTGGGGAGCGAAAGCGGGTCAGCATCGGGCAAGAGATGTTGGTGAACCCTAGTTTGTTGTTGCTTGATGAGCCGACATCCGGGTTGGACTCCACCACGGCCCAGCATATCGTGGCGATGCTCCAGAGGCTCGCCCGAGCCGGCCGGACCGTGGTGACCACCATTCACCAGCCTTCAAGCCGATTGTATTGGATGTTTGATAAGGTTGTGGTGTTGTCGGACGGGTACCCGATTTTTACCGGGCAAACGGGTCGGGTCATGGATTATCTTGAGTCCATTGGATTTGTACCCGCTTTCAATTTCATGAACCCGGCTGATTTTCTGCTTGACCTTGCTAATGGCATAGTTGCTGATGTCAAACAGGATGAGCAGATAGATCACCATGAGGATCAAGCTTCAATCAAACAGTTCCTAGTTTCATCCTATAAGAAGAACTTATACCCTCTTCTCAAACAAGAGATTCAGCAGAATCATAGAGAACTAGCATTTTTTACTTCAGGAACACCTAGAAGTTCTGAGAACCAATGGACCACTAGCTGGTGGGAGCAATTAATGGTTCTGCTTAAGAGGGGTTTAAAGGAAAGGAGGCATGAATCTTATTCTGGCTTAAGGATTTTCCAAGTCTTGTCTGTCTCAATTCTCTCAGGACTTCTGTGGTGGCATTCTGATCCCTCACATGTACAAGACCAGGTAGGCCTGCTATTCTTCTTCTCCATCTTCTGGGGGTTCTTCCCTCTCTTCAATGCCATCTTTGCTTTTCCCTTGGACCGGCCAATGCTGATGAAAGAAAGATCATCAGGCATGTACCATCTATCCTCCTACTATGTAGCCAGGATGGTAGGGGACTTACCAATGGAGCTTGTGCTTCCTACCATCTTTATAACCATCTCTTATTGGATGGGGGGTCTCAAGCCCTCTTTGGTTACATTTGTGTTAACCCTCTTGATCATGCTTTTCAATGTGCTGGTGTCTCAAGGAATAGGCCTTGCACTTGGGGCAATTCTAATGGATGTCAAACAGGCCACAACCTTAGCTTCAGTGACTATGTTGGTGTTTCTTTTGGCTGGAGGCTACTACATTCAGCAAATTCCATTTTTCATAGCTTGGTTGAAGTACATTTCTTTCAGTCACTACTGCTATAAGCTTCTTGTAGGAGTGCAGTACTCAGTAAATGAGGTCTATCAGTGTGGACCAGGGTTGCATTGTAGGATAAGAGATTTTCCTGCCATTAAGTGTCTAGGGCTTGATAGTTTGTGGGAAGATGTGGCTGTATTGGCTGTAATGTTGATTGGATACAGAGTTGTGGCTTATCTAGCTTTGAGGATGGGGCTGCATCATTGA 2043 0.487 MMPPQQETSITSSNIPAIPNRPENRSVHAEPPSSATNIDTKPTFMSNDIHNNDSHQHHPAPSPARFSVLHQSLRPVTLKFEDVSYSITFGRDKSGCVSSQKPKHTRTVLNGVTGMVGPGEVMAMLGPSGSGKTTLLTALADRLAGKLSGAITYNDHPFSSSMRRRIGFVSQDDVLYPHLTVLETLTYAAMLKLPKSLTREEKMEQAEMIIVELGLSRCRNSPIGGGAALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQHIVAMLQRLARAGRTVVTTIHQPSSRLYWMFDKVVVLSDGYPIFTGQTGRVMDYLESIGFVPAFNFMNPADFLLDLANGIVADVKQDEQIDHHEDQASIKQFLVSSYKKNLYPLLKQEIQQNHRELAFFTSGTPRSSENQWTTSWWEQLMVLLKRGLKERRHESYSGLRIFQVLSVSILSGLLWWHSDPSHVQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLMKERSSGMYHLSSYYVARMVGDLPMELVLPTIFITISYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQIPFFIAWLKYISFSHYCYKLLVGVQYSVNEVYQCGPGLHCRIRDFPAIKCLGLDSLWEDVAVLAVMLIGYRVVAYLALRMGLHH 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00763 680 Gene3D - 78 327 IPR027417 -
Pumo8g00763 680 MobiDBLite consensus disorder prediction 1 20 - -
Pumo8g00763 680 Pfam ABC-2 type transporter 290 355 IPR043926 GO:0140359
Pumo8g00763 680 Pfam ABC-2 type transporter 416 622 IPR013525 GO:0016020|GO:0140359
Pumo8g00763 680 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 46 671 - -
Pumo8g00763 680 FunFam ABC transporter G family member 22 96 327 - -
Pumo8g00763 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 327 IPR027417 -
Pumo8g00763 680 ProSitePatterns ABC transporters family signature. 233 247 IPR017871 GO:0005524|GO:0016887
Pumo8g00763 680 MobiDBLite consensus disorder prediction 27 50 - -
Pumo8g00763 680 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 333 IPR003439 GO:0005524
Pumo8g00763 680 MobiDBLite consensus disorder prediction 1 62 - -
Pumo8g00763 680 CDD ABCG_EPDR 75 315 - -
Pumo8g00763 680 Pfam ABC transporter 109 261 IPR003439 GO:0005524
Pumo8g00763 680 SMART AAA_5 118 311 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00763 Pumo-Chr8 29942599 29947855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00763 108 309 Calmodulin-binding Proteins AT2G36910 29.524 3.94e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g00763 K05681 - gmx:100810165 1220.68